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DTSTAMP:20260711T172351Z
UID:c14d907a-a774-405a-b435-069b4388d8d1
DTSTART:20220628T090000Z
DTEND:20220628T170000Z
DESCRIPTION:This is the third and last webinar of the series about [the imp
 act of AlphaFold on training and research in life sciences](https://www.eb
 i.ac.uk/training/events/impact-of-alphafold-on-training-and-research-in-li
 fe-sciences/). This webinar will focus on the impact of AlphaFold on resea
 rch and development in life sciences by highlighting a variety of case stu
 dies from academia as well as industries.\n\nIn this webinar we had the fo
 llowing panel of speakers:\n\n**Jan Kosinski -** AlphaFold has revolutioni
 sed structural biology by enabling the modelling of monomeric proteins and
  small complexes at accuracy similar to experimental structures. However\,
  to model large complexes\, it still needs to be integrated with experimen
 tal data such as cryo-electron microscopy maps. I presented how such an in
 tegrative combination enabled us to model the human nuclear pore complex a
 t unprecedented completeness and precision. I used this example to highlig
 ht the new opportunities for integrative structural biology. \n\n**Juan C
 arlos Mobarec -** Methods and software to obtain information about protein
  structures from amino-acid sequences have been applied in the pharmaceuti
 cal industry over the span of decades. Hence\, what can deliver the AI-con
 taining modelling workflows such as AlphaFold to early stage R&amp\;D? We 
 have pioneered the application of AlphaFold in R&amp\;D on multiple cases.
  Here\, we reviewed use case examples of the latest automated workflow for
  protein structure prediction.\n\n**Juri Rappsilber -** Crosslinking mass 
 spectrometry is now a well-established experimental technique for investig
 ating protein interactions\, structure and function. Crosslinking MS also 
 remains unparalleled in its ability to provide structural information in c
 omplex systems. This is particularly relevant in the light of the most rec
 ent revolutionary advancement in structural biology. Artificial intelligen
 ce program-based predictions of protein structure (e.g. by AlphaFold) are 
 having a wide-ranging impact on our ability to model protein structures bu
 t also to study protein interactions that are yet to be fully understood. 
 Crosslinking mass spectrometry offers here highly relevant experimental da
 ta. Using a crosslinking mass spectrometry study of _Bacillus subtilis_ we
  have investigated different aspects of joining AlphaFold and crosslinking
 . Particularly\, the validity of the ipTM score was probed by crosslinking
  mass spectrometry\, and we present the possibility of assembling larger c
 omplexes based on the pairwise data resulting from crosslinking mass spect
 rometry and the AlphaFold prediction of two-protein interactions. Ultimate
 ly\, our structural understanding of biology stands to gain much from comb
 ining AlphaFold and crosslinking data\, particularly in our drive towards 
 building a structural and functional understanding of the cell.\n\n**Katja
  Luck -** AlphaFold’s ability to predict the structure of folded regions
  of proteins and to identify disordered regions of proteins with unprecede
 nted accuracy transforms experimental design in molecular biology. First\,
  I discussed how AlphaFold can advance the design of functional and well-e
 xpressed protein constructs for the study of protein interactions and prot
 ein binding regions. Second\, I highlighted the potential\, possible appro
 aches but also limitations of AlphaFold for the identification of protein-
 protein interaction interfaces.\n\nPanel discussion was chaired by **Janet
  Thornton**.\n\n 
LOCATION:\, 
SUMMARY:Impact of AlphaFold on research and development
URL;VALUE=URI:https://www.ebi.ac.uk/training/events/impact-alphafold-resear
 ch-and-development
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