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VERSION:2.0
PRODID:icalendar-ruby
CALSCALE:GREGORIAN
BEGIN:VEVENT
DTSTAMP:20260829T112411Z
UID:2cc9274d-4a6c-4a4f-b333-81e9fb7e5fd9
DTSTART:20210420T090000Z
DTEND:20210422T170000Z
DESCRIPTION:Educators:\nAxel von Kamp\, Steffen Klamt\, Sven Thiele (MPI Ma
 gdeburg)\, Frank T. Bergmann\, Ursula Kummer (Heidelberg  University)\, Wo
 lfgang Müller\, Maja Rey\, Andreas Weidemann\, Ulrike Wittig (HITS) (de.N
 BI-SysBio)\n\nDate:\n20. - 22 April 2021\n\nLocation:\nonline\n\nContents:
 \nKey concepts of stoichiometric and kinetic modeling of biochemical netwo
 rks:\n- stoichiometric matrix and stoichiometric networks\n- steady state 
 flux distributions\n- principles of constraint-based modeling\n- metabolic
  flux analysis and flux optimization (flux balance analysis)\n- metabolic 
 pathway analysis with elementary flux modes\n- metabolic network design vi
 a minimal cut sets\n- simulation of dynamic (kinetic) models\n- sensitivit
 y analysis\n- carrying out parameter estimation tasks\n- model exchange us
 ing SBML\nData and model management:\n- manual/programmatic access to reac
 tion kinetics data from SABIO-RK\n- storage and exchange of data and model
 s using FAIRDOMHub/SEEK\n- modeling specific functionalities in FAIRDOMHub
 /SEEK\n \nLearning goals:\nDuring this 3-day course\, attendees will learn
  basic techniques for modeling of biochemical networks including data acce
 ss and storage due to the FAIR principles. The first day introduces princi
 ples of stoichiometric and constraint-based modeling coupled with hands on
  exercises using CellNetAnalyzer. The second day continues with kinetic mo
 deling techniques which will be illustrated and exercised with COPASI. The
  third day SABIO-RK is used as a resource for kinetic data and FAIRDOM Hub
 /SEEK is introduced as a data and model management platform fitted to the 
 needs of systems biologists. The hands on exercises throughout the three d
 ays will ensure that attendees become familiar with the software tools and
  with analyzing\, creating\, editing\, importing\, simulating and storing 
 biochemical networks.\n\nPrerequisites:\nSome knowledge of mathematical mo
 deling will be advantageous.\nThe participants should bring their own lapt
 op with MATLAB installed (if you do not have MATLAB please let us know dur
 ing registration so we can send you information on how to obtain a trial l
 icense).\n\nKeywords:\nCellNetAnalyzer (CNA)\, COPASI\, SBML\, FAIR\, mode
 ling\, kinetic data access\, database\, data and model management\n\nTools
 :\nCellNetAnalyzer\, COPASI\, Matlab\, SABIO-RK\, FAIRDOMHub/SEEK
SUMMARY:Tools for Systems biology modeling and data exchange: COPASI\, Cell
 NetAnalyzer\, SABIO-RK\, FAIRDOMHub/SEEK 2021
URL;VALUE=URI:https://www.denbi.de/training/1155-tools-for-systems-biology-
 modeling-and-data-exchange-copasi-cellnetanalyzer-sabio-rk-fairdomhub-seek
 -2021
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