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- Sheffield Bioinformatics Core26
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Keyword
- RNA-seq
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Scientific topic
- MicroRNA sequencing6
- RNA sequencing6
- RNA-Seq6
- RNA-Seq analysis6
- Small RNA sequencing6
- Small RNA-Seq6
- Small-Seq6
- Transcriptome profiling6
- WTSS6
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- Bioinformatics4
- Genome annotation3
- ChIP-exo2
- ChIP-seq2
- ChIP-sequencing2
- Chip Seq2
- Chip sequencing2
- Chip-sequencing2
- Chromosome walking2
- Clone verification2
- Comparative transcriptomics2
- DNA variation2
- DNA-Seq2
- DNase-Seq2
- De novo genome sequencing2
- Exomes2
- Genetic variation2
- Genome sequencing2
- Genomes2
- Genomic variation2
- Genomics2
- High throughput sequencing2
- High-throughput sequencing2
- Mutation2
- NGS2
- NGS data analysis2
- Next gen sequencing2
- Next generation sequencing2
- Panels2
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- Polymorphism2
- Primer walking2
- Sanger sequencing2
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- Transcriptome2
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- Codon usage1
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- Structural genome annotation1
- Tool integration1
- Tool interoperability1
- Transcription1
- Workflows1
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Operation
- Consensus-based sequence alignment2
- Constrained sequence alignment2
- Data visualisation2
- Expression analysis2
- Expression data analysis2
- Gene expression analysis2
- Gene expression data analysis2
- Gene expression regulation analysis2
- Genetic variation analysis2
- Genetic variation annotation2
- Metagenomic inference2
- Microarray data analysis2
- Molecular visualisation2
- Multiple sequence alignment (constrained)2
- Oligonucleotide alignment2
- Oligonucleotide alignment construction2
- Oligonucleotide alignment generation2
- Oligonucleotide mapping2
- Peak calling2
- Peak-pair calling2
- Plotting2
- Protein binding peak detection2
- Protein expression analysis2
- Read alignment2
- Read mapping2
- Read pre-processing2
- Rendering2
- Sequence alignment2
- Sequence alignment (constrained)2
- Sequence alignment construction2
- Sequence alignment generation2
- Sequence read pre-processing2
- Sequence variation analysis2
- Short oligonucleotide alignment2
- Short read alignment2
- Short read mapping2
- Short sequence read mapping2
- Transcript variant analysis2
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- Allele calling1
- Biological pathway analysis1
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- Data analysis1
- Exome variant detection1
- Functional clustering1
- Functional pathway analysis1
- Functional sequence clustering1
- Genome variant detection1
- Germ line variant calling1
- Mutation detection1
- Pathway analysis1
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- Pathway prediction1
- Pathway simulation1
- Somatic variant calling1
- Variant calling1
- Variant mapping1
- de novo mutation detection1
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Tool
- edgeR3
- BWA2
- Bowtie 22
- DESeq22
- FastQC2
- R2
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- tidybulk1
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Event type
- Workshops and courses39
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Venue
- The Diamond, Workroom 17
- Pam Liversidge Building, Design Studio 1 - D06, or ONLINE3
- Pam Liversidge Building, Design Studio 1, D063
- ONLINE2
- Pam Liversidge Design Studio 1 - D062
- Barber House Boardroom (PROVISIONAL) or ONLINE1
- Barber House Boardroom (Sheffield), or ONLINE1
- Bartolome House Seminar Room EG03, or ONLINE1
- Bartolome House, Seminar Room EG031
- Bartolome House, Seminar Room EG03 (Sheffield)1
- Bartolome House, Seminar Room EG03 (Sheffield), or ONLINE1
- Hansastraße 32, 32 Hansastraße1
- Molecular biotechnology center, university of turin, via nizza 521
- Narva mnt 18, room 20291
- Onsite1
- PC-College, Stresemannstraße 78, 10963 Berlin, Germany1
- Pam Liversidge Building, Design Studio 1 - D05, or ONLINE1
- Room 2-3-41, Monash University, Bandar Sunway1
- Station Biologique De Roscoff1
- Station Biologique De Roscoff, Place Georges Teissier1
- University of Sheffield (see website for details) or ONLINE1
- University of bari1
- University of bari, campus e. quagliariello, aula 4, vecchi istituti biologici, via orabona 41
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City
- Sheffield17
- Sheffield, or online8
- Bari2
- Roscoff2
- Bandar Sunway1
- Berlin1
- München1
- Oxford1
- Rome1
- Tartu1
- Turin1
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Country
- United Kingdom26
- Italy4
- France2
- Germany2
- Estonia1
- Malaysia1
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Sponsor
- Aviesan ITMO GGB2
- IFB2
- INSERM2
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Target audience
- Biologists2
- Cette formation est destinée aux biologistes (ingénieurs, doctorants, chercheurs, enseignants-chercheurs, praticiens…) confrontés à l’analyse de données NGS, et qui ne disposent pas des compétences bioinformatiques suffisantes.2
- Molecular Biologists2
- geneticists2
- Beginners1
- Early/mid-career stage researchers, PhD students1
- Research Scientists1
- Researchers1
- laboratory professionals1
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Eligibility
- Registration of interest3
- First come first served2
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Language
- English8
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Node
- Italy4
- France2
- Switzerland2
- Estonia1
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Instructor
- Raffaele Calogero3
- Luca Alessandrì2
- Adriano Fonzino1
- Alessandro Silvestris1
- Camilla Ugolini1
- Ernesto Picardi1
- Francesco Nicassio1
- Logan Mulroney1
- Tommaso Leonardi1
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