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- Software Carpentry1623
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- Birmingham Metabolomics Training Centre25
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- Earlham Institute17
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- BioExcel12
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- INB: Spanish National Bioinformatics Institute10
- OpenRiskNet10
- Barcelona Supercomputing Center (BSC)9
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- Proteins (proteins)81
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- UniProt: The Universal Protein Resource69
- Ensembl68
- DNA & RNA (dna-rna)66
- R64
- basic bioinformatics62
- data visualisation62
- data management60
- leadership & management60
- genes and genomes56
- wellbeing54
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- DMP52
- torsten schwede & thierry sengstag group51
- transcriptomics50
- ABR46
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- imaging45
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- Data management42
- FAIR42
- NGS41
- Open Science41
- Protein Data Bank in Europe41
- functional genomics40
- grant writing40
- high-performance computing40
- reproducibility39
- mark ibberson group38
- RNA-seq37
- experimental biology35
- API34
- ELIXIR-CONVERGE32
- life sciences31
- data analysis30
- rémy bruggmann group30
- services and resources30
- Ensembl Variant Effect Predictor29
- Genomics29
- eLearning29
- EeLP28
- HPC28
- tess28
- Ensembl Genomes27
- machine learning27
- CONVERGE26
- Nextflow26
- Python25
- graphic design25
- High Performance Computing24
- Transcriptomics24
- Workflows24
- AlphaFold Database23
- metadata23
- RNA-Seq22
- Data management plan22
- Data visualisation22
- medicine and health22
- microscopy22
- ELN21
- InterPro21
- Training21
- PDBe20
- biomarkers20
- R-programming19
- Cross domain (cross-domain)19
- Europe PubMed Central19
- Expression Atlas19
- Gene expression (gene-expression)19
- RDM19
- biochemistry19
- data publication19
- generative AI19
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- single-cell biology19
- AI18
- IntAct Molecular Interaction Database18
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- Scientific topic
- Bioinformatics709
- Genome annotation318
- Exomes309
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- Personal genomics309
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- Viral genomics309
- Whole genomes309
- Biological modelling220
- Biological system modelling220
- Systems biology220
- Systems modelling220
- Biomedical research189
- Clinical medicine189
- Experimental medicine189
- General medicine189
- Internal medicine189
- Medicine189
- Data management156
- Metadata management156
- Research data management (RDM)156
- Bottom-up proteomics154
- Discovery proteomics154
- MS-based targeted proteomics154
- MS-based untargeted proteomics154
- Metaproteomics154
- Peptide identification154
- Protein and peptide identification154
- Proteomics154
- Quantitative proteomics154
- Targeted proteomics154
- Top-down proteomics154
- Cloud computing61
- Computer science61
- HPC61
- High performance computing61
- High-performance computing61
- Exometabolomics60
- LC-MS-based metabolomics60
- MS-based metabolomics60
- MS-based targeted metabolomics60
- MS-based untargeted metabolomics60
- Mass spectrometry-based metabolomics60
- Metabolites60
- Metabolome60
- Metabolomics60
- Metabonomics60
- NMR-based metabolomics60
- Immunology56
- Computational pharmacology54
- Pharmacoinformatics54
- Pharmacology54
- Comparative transcriptomics53
- Transcriptome53
- Transcriptomics53
- Data archival52
- Data archiving52
- Data curation52
- Data curation and archival52
- Data preservation52
- Database curation52
- Research data archiving52
- Biomathematics51
- Computational biology51
- Mathematical biology51
- Theoretical biology51
- FAIR data48
- Findable, accessible, interoperable, reusable data48
- Active learning46
- Ensembl learning46
- Kernel methods46
- Knowledge representation46
- Machine learning46
- Neural networks46
- Pipelines46
- Recommender system46
- Reinforcement learning46
- Software integration46
- Supervised learning46
- Tool integration46
- Tool interoperability46
- Unsupervised learning46
- Workflows46
- RNA-Seq analysis45
- Data visualisation39
- MicroRNA sequencing36
- RNA sequencing36
- RNA-Seq36
- Small RNA sequencing36
- Small RNA-Seq36
- Small-Seq36
- Transcriptome profiling36
- WTSS36
- Whole transcriptome shotgun sequencing36
- miRNA-seq36
- Metagenomics34
- Shotgun metagenomics34
- Data rendering32
- Antimicrobial stewardship30
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- Operation
- Data handling43
- File handling43
- File processing43
- Processing43
- Report handling43
- Utility operation43
- Data brokering24
- Data deposition24
- Data deposition brokering24
- Data submission24
- Database deposition24
- Database submission24
- Data management planning8
- Data analysis7
- Allele calling5
- Data visualisation5
- Exome variant detection5
- Genome variant detection5
- Germ line variant calling5
- Molecular visualisation5
- Mutation detection5
- Plotting5
- Rendering5
- Somatic variant calling5
- Variant calling5
- Variant mapping5
- Visualisation5
- de novo mutation detection5
- Docking simulation4
- Macromolecular docking4
- Molecular docking4
- Molecular surface analysis4
- Structure database search4
- Data formatting3
- Data reformatting3
- File format conversion3
- File formatting3
- File reformatting3
- Format conversion3
- Functional genome annotation3
- Genome annotation3
- Metagenome annotation3
- Molecular dynamics3
- Molecular dynamics simulation3
- Optimisation and refinement3
- Protein dynamics3
- Structural genome annotation3
- Structure analysis3
- Attribute selection2
- Binding site prediction2
- CG analysis2
- Chemical class enrichment2
- Chemical similarity enrichment2
- Contact map prediction2
- Data filtering2
- Feature extraction2
- Feature projection2
- Feature selection2
- File format validation2
- Format validation2
- Hydrogen bond calculation2
- Ligand-binding site detection2
- Ligand-binding site prediction2
- MD analysis2
- Nucleic Acid Dynamics Analysis2
- Peptide-protein binding prediction2
- Protein Dynamics Analysis2
- Protein binding site detection2
- Protein binding site prediction2
- Protein contact map prediction2
- Protein flexibility and motion analysis2
- Protein flexibility prediction2
- Protein folding pathway prediction2
- Protein motion prediction2
- Protein property calculation2
- Protein property calculation (from sequence)2
- Protein property calculation (from structure)2
- Protein property rendering2
- Protein structural property calculation2
- Protein structure prediction2
- Residue contact prediction2
- Residue interaction calculation2
- Residue interaction prediction2
- Sequence filtering2
- Simulation analysis2
- Structural property calculation2
- Trajectory analysis2
- Trajectory visualization2
- Variable selection2
- Variable subset selection2
- rRNA filtering2
- Alternative splicing analysis1
- Alternative splicing detection1
- Alternative splicing prediction1
- Annotation1
- Biological network analysis1
- Biological network modelling1
- Biological network prediction1
- Biological pathway analysis1
- Biological pathway modelling1
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- Tool
- Data Stewardship Wizard30
- European Nucleotide Archive (ENA)10
- RDMkit10
- omnipy9
- AutoDock Vina7
- Ontology Lookup Service7
- SPCI7
- AlphaFold 25
- PyMOL4
- AlphaCharges2
- AlphaFill2
- AlphaFind2
- FAIRDOM-SEEK2
- Galaxy2
- Gromacs2
- Metabolic Atlas2
- PDBe2
- TmAlphaFold database2
- WorkflowHub2
- ANASTASIA1
- BioSamples1
- BioTranslator1
- CAVER1
- CAVER Web1
- CalFitter1
- CaverDock1
- ChEMBL1
- DECIPHER1
- DESeq21
- DMPortal - BioData.pt Data Management Portal1
- Data Information System (DAISY)1
- EGA1
- Ensembl1
- EnzymeMiner1
- FireProt1
- FireProt 2.01
- FireProt ASR1
- FireProtDB1
- HADDOCK web portal1
- HotSpot Wizard1
- Lab Integrated Data (LabID)1
- LoopGrafter1
- Open PHACTS API1
- Open Targets1
- PDBe-KB1
- SEEK1
- Snakemake1
- SoluProt1
- SoluProtMutsupDB1
- Tamarind1
- The Chemistry Development Kit1
- Workflow4Metabolomics1
- edgeR1
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- Workshops and courses7298
- Meetings and conferences1048
- Receptions and networking10
- Awards and prizegivings2
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- Venue
- Ghent - VIB/UGent FSVM II, Technologiepark 75306
- , 292
- SIB283
- Leuven - Campus Gasthuisberg, Herestraat 49182
- European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus120
- European Bioinformatics Institute, Hinxton117
- Leuven - Park Inn by Radisson, Martelarenlaan 3688
- Online77
- University of Cambridge, Downing Site71
- Internet60
- Antwerp - Campus Drie Eiken UAntwerpen, Universiteitsplein 136
- Belval Campus, Luxembourg36
- European Bioinformatics Institute (EMBL-EBI) - Training Room 1, Wellcome Genome Campus36
- European Bioinformatics Institute (EMBL-EBI) - Training Room 2, Wellcome Genome Campus33
- Ghent - Bio-Accelerator Meeting Center, Technologiepark 2132
- Ghent - Clemenspoort, Overwale 331
- Park Inn by Radisson Leuven30
- University of Melbourne30
- European Molecular Biology Laboratory29
- EMBL Heidelberg26
- Clemenspoort Gent24
- Moscone North Convention Center24
- Brussels - SciMingo Office, Leopoldstraat 623
- University of Oklahoma23
- Wellcome Trust Genome Campus23
- online23
- Brussels - VUB Campus Etterbeek, Pleinlaan 222
- Stanford University22
- Ghent - VIB/UGent FSVM I, Technologiepark 7121
- Amsterdam, Netherlands19
- University of Illinois18
- Earlham Institute (EI), Colney Lane17
- European Bioinformatics Institute17
- Park Inn by Radisson Leuven, Martelarenlaan 3617
- SciLifeLab Uppsala - Navet, Husargatan 317
- University of Oslo17
- Australia16
- Griffith University16
- University of Toronto16
- Oklahoma State University15
- Virtual, EMBL-EBI15
- Wellcome Genome Campus15
- European Bioinformatics Institute (EMBL-EBI)14
- Federal Reserve Board14
- Heidelberg14
- Imperial College London14
- Place Georges Teissier14
- University of Alberta14
- Bio-Accelerator Meeting Center Ghent, Technologiepark 2113
- Lawrence Berkeley National Laboratory13
- Leiden, Netherlands13
- United Kingdom13
- 187 Grattan St, 187, Grattan Street12
- University of Arizona12
- The Diamond, Workroom 111
- The University of Washington eScience Institute11
- University of British Columbia11
- University of Manchester11
- University of Oxford11
- University of Southampton11
- 24 chemin de borderouge CS 52627 – Auzeville10
- Bio-Accelerator Meeting Center Ghent10
- Macquarie University10
- Tallinn University, 25 Narva maantee10
- University College London10
- University of Chicago10
- iGent10
- Birmingham Metabolomics Training Centre9
- Janelia Farm Research Campus9
- North-West University9
- School of Biosciences - University of Birmingham9
- VIB HQ, Suzanne Tassierstraat 19
- Campus Gasthuisberg, Herestraat 498
- EBI, Wellcome Genome Campus8
- EMBL8
- EMBL-EBI8
- Lab-14, VLSCI8
- Leuven - Provinciehuis Vlaams-Brabant, Provincieplein 18
- ONLINE8
- Pacific Northwest National Laboratory8
- Pam Liversidge Design Studio 1 - D068
- Simon Fraser University8
- University of Texas at Arlington8
- University of Waterloo8
- Wageningen, Netherlands8
- 7 avenue Blaise Pascal7
- Bartolome House, Seminar Room EG037
- EMBL-EBI, Wellcome Genome Campus7
- Hinxton7
- Microsoft Teams7
- National Institute of Standards and Technology7
- Onsite7
- The University of Queensland7
- Translational Research Institute, 37, Kent Street7
- UW Madison7
- University of California, San Francisco7
- University of Edinburgh7
- University of Florida Informatics Institute7
- University of Kansas7
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- City
- Zwijnaarde395
- Leuven372
- Cambridge328
- Heidelberg175
- Lausanne159
- Streamed155
- Online119
- Hinxton118
- Basel85
- Boston85
- Ghent72
- Brussels66
- Melbourne63
- Bern56
- Tartu54
- San Francisco47
- San Diego46
- Uppsala45
- Barcelona43
- Gent43
- London40
- Antwerpen39
- Amsterdam38
- Sheffield38
- Berlin36
- Espoo34
- Toronto32
- Washington32
- Leiden30
- Streamed from Lausanne30
- Rome29
- Norwich28
- Streamed from Basel28
- Zürich27
- Birmingham23
- Lisbon22
- Oslo22
- Wageningen22
- Liverpool20
- Montpellier19
- Philadelphia19
- Roscoff19
- Sydney19
- Prague18
- New York17
- Athens16
- Geneva16
- Paris16
- Queensland16
- Tallinn16
- Maastricht15
- Sheffield, or online15
- Zurich14
- Chicago13
- Utrecht13
- Fribourg12
- Knoxville12
- Ljubljana12
- Oxford12
- Bari11
- Bergen11
- Bielefeld11
- Lyon11
- Manchester11
- Rotterdam11
- Saint Lucia11
- Solna11
- Stockholm11
- Brisbane10
- Brno10
- Hamburg10
- Madrid10
- Baltimore9
- Clermont-Ferrand9
- Faro9
- Montreal9
- Nijmegen9
- Oeiras9
- Streamed from Bern9
- Streamed from Geneva9
- Erasmus MC8
- Freiburg8
- Lund8
- Nicosia8
- Olomouc8
- Orlando8
- Porto8
- Singapore8
- Vancouver8
- Cape Town7
- Dublin7
- Edmonton7
- Pultusk7
- Roma7
- Seattle7
- University of Melbourne7
- Wageningen Campus7
- Berkeley6
- Bethesda6
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- Country
- Belgium1025
- United Kingdom910
- Switzerland662
- United States of America510
- Germany412
- Australia295
- Netherlands220
- Italy140
- France114
- Sweden107
- Canada95
- Spain85
- Estonia72
- Portugal72
- Norway46
- Finland43
- Greece36
- Czech Republic29
- Czechia24
- South Africa24
- Brazil20
- Online19
- New Zealand17
- Poland17
- India16
- Slovenia16
- Austria13
- Ireland13
- Israel13
- China12
- Argentina11
- Luxembourg11
- Malaysia11
- Denmark10
- Japan10
- Singapore10
- Virtual10
- Cyprus9
- Colombia8
- Costa Rica8
- Mexico8
- Turkey8
- Taiwan, Province of China7
- Egypt6
- Hungary6
- Nigeria6
- webinar6
- South Korea5
- Amsterdam4
- Ethiopia4
- Malawi4
- Peru4
- United Arab Emirates4
- Wageningen4
- Chile3
- Korea (Republic of)3
- Malta3
- Philippines3
- Romania3
- Thailand3
- Uruguay3
- nor3
- Cuba2
- Ghana2
- Hogeschool Leiden online2
- Indonesia2
- Kenya2
- Panama2
- Russian Federation2
- Ukraine2
- Afghanistan1
- Amsterdam UMC1
- Bangladesh1
- Breda1
- Cancer Research UK Therapeutic Discovery Laboratories - London Bioscience Innovation Centre1
- Croatia1
- Delft1
- EMBL-EBI1
- ErasmusMC Rotterdam Netherlands1
- Global1
- Latvia1
- Leiden1
- Lithuania1
- Lorentz Center@Snellius1
- Maastricht University1
- Monaco1
- Morocco1
- Online / webinar1
- Qatar1
- SURF Utrecht and DANS in The Hague1
- Science Park (building Lab42)1
- Utrecht University1
- Viet Nam1
- Virtual/online1
- Vrije Universiteit Amsterdam1
- W31
- Wageningen Campus1
- Wageningen University and Research1
- cyprus1
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- Sponsor
- ELIXIR Belgium188
- NERC28
- Vlaams Supercomputer Centrum28
- SciComm Academy27
- ELIXIR Europe23
- German Network for Bioinformatics Infrastructure Service, Training, Cooperations & Cloud Computing22
- Centre for Digital Life Norway19
- Australian BioCommons15
- Melbourne Bioinformatics12
- The University of Melbourne12
- University of Freiburg12
- ELIXIR CZ10
- ELIXIR9
- Helis Academy9
- Erasmus Medical Center8
- Institut Français de Bioinformatique8
- NanoCommons8
- ABRomics7
- Digital Scholarship Centre (University of Oslo)7
- ELIXIR Norway7
- ELIXIR-CONVERGE7
- Ghent University7
- Avans Hogeschool6
- European Union6
- Flanders BioImaging6
- The Carpentries6
- The Pennsylvania State University6
- ELIXIR Converge5
- ELIXIR Italy5
- This course is funded as part of the UKRI Innovation Scholars. Data Science Training in Health and Bioscience call (DaSH). (MR/V038966/1)5
- de.NBI5
- EU H20204
- H3ABioNet4
- Ministry of Science, Research and Arts4
- Palacky University Olomouc4
- Pôle National de Données de Biodiversité4
- 101100604 - DIGITAL-2022-TRAINING-023
- Aurora Alliance3
- BePa3
- COST Association3
- Co-funded by the European Commission3
- European Commission3
- FWO3
- German Competence Center Cloud Technologies for Data Management and Processing3
- INB/ELIXIR-ES3
- Interreg Vlaanderen-Nederland3
- Merck3
- NanoSolveIT3
- Palacký University Olomouc3
- RDA-Portugal3
- SciLifeLab3
- BD2
- Bioké2
- AIBIO-UK2
- BIOMEÇ2
- BioExcel2
- BioMedData2
- Brazilian Biophysical Society2
- ELIXIR EXCELERATE2
- ELIXIR Training Platform2
- ELIXIR-IIB2
- ELIXIR-SE2
- ELIXIR-UK2
- EMBO2
- EOSC | FAIR2Adapt2
- EOSC-Life2
- ERASMUS+2
- EU H2020 NanoCommons2
- Elixir Belgium2
- European Union - NextGenerationEU2
- Flanders2
- Funded by the European Union2
- Futuros Sustentáveis2
- Genscript2
- IFB2
- IRCCS Ospedale San Raffaele2
- LINQ management GmbH2
- MetaboHUB2
- Muséum national d'Histoire naturelle2
- NBIS2
- NFDI4Microbiota2
- PRR - Recovery and Resilience Plan2
- Pan-Africa network for genomic surveillance of poverty related diseases and emerging pathogens2
- Pan-African Consortium for the Evaluation of Antituberculosis Antibiotics2
- Provincie Antwerpen2
- RFMF2
- Recovery and Resilience Plan2
- Research Council of Norway2
- South African National Bioinformatics Institute, University of the Western Cape2
- Spanish National Bioinformatics Institute (INB/ELIXIR-ES)2
- Spanish Supercomputing Network (RES)2
- Swiss Institute of Bioinformatics (SIB)2
- Swiss Tropical and Public Health Institute2
- The European & Developing Countries Clinical Trials Partnership2
- The European Union2
- The Foundation for Innovative New Diagnostics2
- Twist Bioscience2
- Universidade Federal Do Rio de Janeiro (UFRJ)2
- Università Vita-Salute San Raffaele2
- Vlaanderen2
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- Target audience
- PhD students362
- Graduate students294
- Academics292
- Industry292
- PhD287
- Researchers178
- Life Science Researchers48
- Biologists37
- Beginner35
- bioinformaticians30
- Students28
- Master students27
- PhD Students22
- Post Docs17
- life scientists17
- All postgraduates15
- PhD candidates15
- mixed audience15
- post-docs15
- PI14
- Bioinformaticians13
- Molecular Biologists13
- Professors12
- Graduate Students11
- PhD candidate10
- Postdoctoral Fellows10
- Wet-lab researchers and bioinformaticians10
- Biologists, Genomicists, Computer Scientists9
- Technicians9
- Undergraduate students9
- data stewards9
- Data managers8
- Engineers8
- Masters students8
- data managers8
- data steward / data manager8
- researchers8
- Beginners7
- DMP writers7
- Life Scientists7
- Pathologists7
- Postdoctoral Researchers7
- Senior scientist/ Principal investigator7
- postdoctoral researchers7
- Bioinformatician6
- Clinicians6
- Data stewards6
- Expert Support6
- PostDocs6
- Researcher6
- Trainers6
- Early Career Researcher5
- Life sciences5
- PIsSenior scientist/ Principal investigator5
- Post-Docs5
- Researcher in life sciences5
- Scientists5
- postdocs5
- software developers, bioinformaticians5
- Anyone intersted in GWAS and using the H3Africa genotyping chip4
- Bioinformaticians and wet-lab biologists who can program in Perl, Python or R.4
- Biological sciences research students and postdocs who may want to use HPC in their research.Please note that Biochemistry first year graduate students book this course via their Moodle site not here.4
- Computational biologists4
- Data Scientists4
- Early Career Researchers (ECRs)4
- Early career investigators4
- Government4
- PhD Students, Post-Doc research scientists4
- PhD student4
- Post docs4
- Postgraduate students4
- Principal Investigators4
- Professional science4
- Training Designers4
- Training instructors4
- Wet-lab Researchers4
- beginner bioinformaticians4
- Academic3
- Anyone who wants to become a teacher / trainer or a better one3
- Bench biologists3
- Bioinformaticians and wet-lab biologists who can program in Python or R.3
- Biologist3
- Biomedical researchers3
- Clinical Scientists3
- Core Facility Managers3
- Data Managers3
- Evolutionary Biologists3
- Industry professionals, and people with a keen interest in the subject.3
- Job seeker3
- Lab managers3
- Post-Doctoral Fellows3
- Post-docs3
- Postdoctoral researchers3
- Programmers3
- Research Scientists3
- Research presentation3
- Research scientists3
- Small and Medium-sized Enterprises (SMEs)3
- Student3
- This course is aimed at advanced PhD students and post-doctoral researchers who are applying or planning to apply high throughput sequencing technologies in cancer research and wish to familiarise themselves with bioinformatics tools and data analysis methodologies specific to cancer data. Familiarity with the technology and biological use cases of high throughput sequencing is required, as is some experience with R/Bioconductor (basic understanding of the R syntax and ability to manipulate R objects) and the Unix/Linux operating system.3
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- Eligibility
- First come first served271
- Registration of interest216
- By invitation37
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- Language
- English1724
- Italian3
- Czech1
- German1
- Portuguese1
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- Node
- EMBL-EBI1466
- Belgium1316
- Switzerland587
- Germany261
- Netherlands245
- Sweden209
- France182
- United Kingdom179
- Finland137
- Italy114
- Estonia100
- Luxembourg75
- Norway74
- Portugal67
- Czech Republic50
- Spain32
- Slovenia31
- Greece23
- Cyprus8
- Denmark5
- Ireland4
- Israel4
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- Collection
- ELIXIR Biodiversity Community43
- ELIXIR Systems Biology Community: training events and materials21
- PHENotyping and EnviroTyping (PHENET training collection)11
- HemaFAIR Training: Applying FAIR Principles in Hematology Research9
- Impact of research infrastructures5
- PINK project4
- Single-cell Omics Community - collection of courses and materials4
- ELIXIR hCNV community - collection of courses and materials.2
- ELIXIR Federated Human Data Community2
- ELIXIR Toxicology Community2
- 523BET - Nhà Cái 523BET Casino Uy Tín Nhất Việt Nam1
- BioC20261
- Byte-sized RSE series1
- CSAMA 20261
- EuroBioC20261
- VEIS - Value of the EGA for Industry and Society1
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- Contributor
- Jakub Sedzinski1
- Katarzyna Kamieniecka1
- Khaled Jum'ah1
- Krzysztof Poterlowicz1
- Markus List 1
- Oliver Stegle1
- Richard Rottger1
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- Instructor
- Janick Mathys147
- Bruna Piereck73
- Alexander Botzki68
- Wandrille Duchemin59
- Matheus Lourenço52
- True Colours48
- Christof De Bo45
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