Training materials
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Karel Berka and Marian Novotný - Alphafoldology - Machine Learning revolution in structural biology
Structure prediction Structural biology Machine learning AlphaFold Database (13181) Alphafold Structures (structures) protein-3D-structure Machine learning
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e-learning
Avian influenza viral strain analysis from gene segment sequencing data
•• IntermediateGenetic variation Variant Analysis one-health virology -
ISMARA: A tool to infer genome-wide regulatory interactions
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Video
Parameter Scanning and Sampling in COPASI
• BeginnerSimulation experiment Modelling and simulation Data analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Metabolic Control Analysis in COPASI
• BeginnerSimulation experiment Systems biology Modelling and simulation Data analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Steady State Analysis in COPASI
• BeginnerSystems biology Computational biology Simulation experiment Modelling and simulation Visualisation -
Video
Time Course Simulation in COPASI
• BeginnerSimulation experiment Modelling and simulation Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Model Creation using COPASI
• BeginnerSimulation experiment Modelling and simulation Visualisation SystemsBiology ComputationalBiology Computational modelling modeling Biomodelling Model Kinetic modeling … -
e-learning
Python - Coding Style
•• IntermediateSoftware engineering Foundations of Data Science jupyter-notebook -
Video, E-Learning
How to create a concept for the SPHN Dataset
• BeginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design …