Test Space Please Ignore
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Transcriptome profiling
    • Genome annotation199
    • Comparative transcriptomics179
    • Transcriptome179
    • Transcriptomics179
    • Exomes178
    • Genomes178
    • Genomics178
    • Personal genomics178
    • Synthetic genomics178
    • Viral genomics178
    • Whole genomes178
    • R150
    • R program150
    • R script150
    • Bayesian methods122
    • Biostatistics122
    • Descriptive statistics122
    • Gaussian processes122
    • Inferential statistics122
    • Markov processes122
    • Multivariate statistics122
    • Probabilistic graphical model122
    • Probability122
    • Statistics122
    • Statistics and probability122
    • Algorithms116
    • Computer programming116
    • Data structures116
    • MicroRNA sequencing116
    • Programming languages116
    • RNA sequencing116
    • RNA-Seq116
    • RNA-Seq analysis116
    • Small RNA sequencing116
    • Small RNA-Seq116
    • Small-Seq116
    • Software development116
    • Software engineering116
    • WTSS116
    • Whole transcriptome shotgun sequencing116
    • miRNA-seq116
    • Chromosome walking104
    • Clone verification104
    • DNA-Seq104
    • DNase-Seq104
    • High throughput sequencing104
    • High-throughput sequencing104
    • NGS104
    • NGS data analysis104
    • Next gen sequencing104
    • Next generation sequencing104
    • Panels104
    • Primer walking104
    • Sanger sequencing104
    • Sequencing104
    • Targeted next-generation sequencing panels104
    • Active learning78
    • Ensembl learning78
    • Kernel methods78
    • Knowledge representation78
    • Machine learning78
    • Neural networks78
    • Recommender system78
    • Reinforcement learning78
    • Supervised learning78
    • Unsupervised learning78
    • Python75
    • Python program75
    • Python script75
    • py75
    • Data management74
    • Metadata management74
    • Research data management (RDM)74
    • Metagenomics72
    • Shotgun metagenomics72
    • Single-cell genomics60
    • Single-cell sequencing60
    • Antimicrobial stewardship55
    • Medical microbiology55
    • Microbial genetics55
    • Microbial physiology55
    • Microbial surveillance55
    • Microbiological surveillance55
    • Microbiology55
    • Molecular infection biology55
    • Molecular microbiology55
    • Bottom-up proteomics53
    • Discovery proteomics53
    • FAIR data53
    • Findable, accessible, interoperable, reusable data53
    • MS-based targeted proteomics53
    • MS-based untargeted proteomics53
    • Metaproteomics53
    • Peptide identification53
    • Protein and peptide identification53
    • Proteomics53
    • Quantitative proteomics53
    • Targeted proteomics53
    • Top-down proteomics53
    • Show N_FILTERS more
    • Tool
    • Bioconductor1
    • Show N_FILTERS more
    • Content provider
    • Glittr.org97
    • ERGA Knowledge Hub11
    • European Bioinformatics Institute (EBI)7
    • Bioconductor1
    • Show N_FILTERS more
    • Keyword
    • RNA-seq108
    • Transcriptomics91
    • Single-cell sequencing47
    • Next generation sequencing37
    • R31
    • Genomics20
    • Unix/Linux10
    • General9
    • Python8
    • Variant analysis8
    • Genome annotation6
    • Statistics6
    • ATAC-seq5
    • ChIP-seq5
    • Data visualization5
    • Epigenetics5
    • Reproducibility5
    • Spatial transcriptomics5
    • Pathways and Networks4
    • Version control4
    • Data management3
    • Long read sequencing3
    • Nextflow3
    • Snakemake3
    • Containerization2
    • Data science2
    • Galaxy2
    • Genome assembly2
    • High performance computing2
    • Machine learning2
    • Multiomics2
    • Quality Control2
    • Quarto2
    • Rmarkdown2
    • Workflows2
    • Cloud computing1
    • Comparative genomics1
    • DNA-protein interaction1
    • Enrichment analysis1
    • Epigenetic modifications1
    • FAIR data1
    • Functional Genomics1
    • Histone modifications1
    • Julia1
    • Metagenomics1
    • Microarray1
    • NGS1
    • Next-generation sequencing1
    • Population genetics1
    • Proteomics1
    • RNA-protein interaction1
    • Real-time PCR1
    • Singularity1
    • Show N_FILTERS more
    • Competency level
    • Not specified116
    • Show N_FILTERS more
    • Licence
    • License Not Specified74
    • Creative Commons Attribution 4.0 International11
    • GNU General Public License v3.0 only9
    • Creative Commons Zero v1.0 Universal8
    • MIT License8
    • Creative Commons Attribution Share Alike 4.0 International3
    • Apache License 2.01
    • BSD 3-Clause "New" or "Revised" License1
    • Creative Commons Attribution Non Commercial 4.0 International1
    • Show N_FILTERS more
    • Target audience
    • Clinicians1
    • PhD students1
    • Show N_FILTERS more
    • Author
    • Teaching materials at the Harvard Chan Bioinformatics Core8
    • UC Davis Bioinformatics Core Training Page8
    • bioinformatics.ca7
    • CRUK CI Bioinformatics Core5
    • NBIS - National Bioinformatics Infrastructure Sweden5
    • SIB Swiss Institute of Bioinformatics5
    • The Gulbenkian Training Programme in Bioinformatics4
    • Alex's Lemonade Stand Foundation3
    • The Carpentries Incubator3
    • Health Data Science Sandbox2
    • Julien Roux2
    • Leiden Computational Biology Center2
    • Aedin Culhane1
    • Amarinder Singh Thind1
    • Applied Genomics1
    • Bioconductor1
    • Biocore@CRG1
    • Boas Pucker1
    • BrainOmicsCourse1
    • Canadian Bioinformatics Workshops1
    • Cellular Genomics Informatics1
    • Common Fund Data Ecosystem1
    • Computational Biology and Bioinformatics at UCLouvain1
    • Deplancke's Lab1
    • Erasmus Medical Center1
    • Fred Hutch Data Science Lab1
    • Functional Genomics Laboratory1
    • Genome Informatics Facility1
    • Institut Français de Bioinformatique (IFB)1
    • Katharina Hoff1
    • Kelly Street1
    • Khushbu Patel1
    • Laboratory of Genomics and Bioinformatics1
    • Martin Morgan1
    • Melbourne Bioinformatics1
    • Michael Love et al.1
    • Monash Data Fluency1
    • OSCA Source Code Management1
    • Pachter Lab1
    • Python club at University of Algarve1
    • Rhonda Bacher1
    • Saez Lab1
    • Stefano Mangiola1
    • Stephen Turner1
    • Sydney Informatics Hub1
    • The Griffith Lab1
    • The McDonnell Genome Institute1
    • Theis Lab1
    • Thomas Denecker1
    • Tidy-transcriptomics workshops1
    • Xueyi Dong1
    • Yunshun Chen1
    • fmicompbio1
    • gladstone-institutes1
    • instructr1
    • scverse1
    • Show N_FILTERS more
    • Contributor
    • Canadian Bioinformatics Workshops8
    • Hannah Lyman8
    • Will Gammerdinger8
    • Radhika Khetani7
    • Hugo Tavares6
    • Jihe Liu6
    • Meeta Mistry6
    • Abigail Edwards5
    • Geert van Geest5
    • Amélie Julé4
    • AshKernow4
    • Maria Doyle4
    • Matt Settles4
    • Miguel Cardoso4
    • The Gulbenkian Training Programme in Bioinformatics4
    • bpdurbin4
    • jessyjli4
    • marypiper4
    • msimoneau4
    • Ally Hawkins3
    • Charlotte Soneson3
    • Ilya Sytchev3
    • Jaclyn Taroni3
    • Jen O'Malley3
    • Joshua Shapiro3
    • Julien Roux3
    • Kelsy Cotto3
    • Philipp A.3
    • Stephanie J. Spielman3
    • ahmedmahfouz3
    • eberdan3
    • hwick3
    • Åsa Björklund3
    • Alexandru Mahmoud2
    • Candace Savonen2
    • Chris Miller2
    • Darío Hereñú2
    • Deepak Tanwar2
    • Edmund Miller2
    • Elizabeth Partan2
    • Emma Dann2
    • Heather Gibling2
    • Isabel Duarte2
    • Jose Alejandro Romero Herrera2
    • Kartik Singhal2
    • Laurent Gatto2
    • Lukas Heumos2
    • Malachi Griffith2
    • Mariam Khanfar2
    • Mohammed2
    • My Hoang2
    • Noor Sohail2
    • Obi Griffith2
    • Roy Francis2
    • Salehkarim212
    • Samuele Soraggi2
    • Stefano Mangiola2
    • TaniaW2
    • Thomas Denecker2
    • Toby Hodges2
    • Upen Bhattarai2
    • Zachary Skidmore2
    • actions-user2
    • clairetn2
    • fgomez022
    • hackmd-deploy2
    • hxf1900022
    • lgeistlinger2
    • muneeryaqub2
    • sballereau2
    • syamauchi20002
    • zhibinlu2
    • Aaron Lun1
    • Abhijna Parigi1
    • Aditya Singh1
    • Adrija Kalvisa1
    • Aedin Culhane1
    • Alan O'Callaghan1
    • Alba Refoyo Martínez1
    • Alberto Valdeolivas1
    • Aleksandra E. Badaczewska-Dawid1
    • Alessia Valenti1
    • Alex Lederer1
    • Alex Predeus1
    • Alex SMITH1
    • Alexander Pico1
    • Amanda Charbonneau1
    • Amarinder Singh Thind1
    • Anders Riutta1
    • Andrew Ghazi1
    • Andrew Robinson1
    • Andrew Severin1
    • Anna Schaar1
    • Anna Syme1
    • Anthony Bretaudeau1
    • Anthony Christidis1
    • Arun Seetharam1
    • Attila Gabor1
    • Aurelien Dugourd1
    • Avi Srivastava1
    • Show N_FILTERS more
    • Resource type
    • Recorded webinar6
    • e-learning1
    • Show N_FILTERS more
    • Node
    • Switzerland108
    • EMBL-EBI7
    • Show N_FILTERS more
  • Only show materials from current space
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Transcriptome profiling

and User: scraper

and Across all spaces: true

116 materials found
  • Recorded webinar

    Spatial transcriptomics in action: a case study from human reproductive development

    ELIXIR node event
    Transcriptomics RNA-Seq
  • GTPB/ADER18F

    ELIXIR node event
    Sequencing Transcriptomics RNA-Seq RNA-seq Transcriptomics Next generation sequencing
  • GTPB/ADER18S

    ELIXIR node event
    Sequencing Transcriptomics RNA-Seq RNA-seq Transcriptomics Next generation sequencing
  • Recorded webinar

    Interactive visualisation of spatial transcriptomics data

    ELIXIR node event
    Transcriptomics RNA-Seq Data visualisation
  • Recorded webinar

    Mapping tissue remodelling using sequencing-based spatial transcriptomics

    ELIXIR node event
    Transcriptomics RNA-Seq
  • instructr/rnaseq_counts2bio

    ELIXIR node event
    Sequencing Transcriptomics RNA-Seq RNA-seq Transcriptomics Next generation sequencing R
  • bioinformaticsdotca/OMPRN_2024

    ELIXIR node event
    Sequencing Transcriptomics RNA-Seq Next generation sequencing RNA-seq Transcriptomics
  • bioinformaticsdotca/RNA_2025

    ELIXIR node event
    Sequencing Transcriptomics RNA-Seq RNA-seq Transcriptomics Next generation sequencing
  • bioinformaticsdotca/scRNA_2025

    ELIXIR node event
    Transcriptomics Single-cell sequencing RNA-Seq Single-cell sequencing RNA-seq Transcriptomics
  • bioinformaticsdotca/PGX_2024

    ELIXIR node event
    Genomics Multiomics RNA-Seq Multiomics RNA-seq R Genomics
  • 1
  • 2
  • 3
  • 4
  • 5
  • 6
  • 7
  • 8
  • 9
  • 10
  • 11
  • 12
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.