Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • DNA variation4
    • Genetic variation4
    • Genomic variation4
    • Mutation4
    • Polymorphism4
    • Somatic mutations4
    • Antimicrobial stewardship1
    • Assembly1
    • Biological sequences1
    • DNA polymorphism1
    • Exomes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Medical microbiology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microsatellites1
    • Molecular infection biology1
    • Molecular microbiology1
    • Personal genomics1
    • RFLP1
    • SNP1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Single nucleotide polymorphism1
    • Synthetic genomics1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • Viral genomics1
    • Whole genomes1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • BWA4
    • SAMtools3
    • fastp3
    • BamTools2
    • MAFFT2
    • QualiMap2
    • iVar2
    • FastQC1
    • FreeBayes1
    • SRA Software Toolkit1
    • UCSC Genome Browser Utilities1
    • VAPOR1
    • Vcflib1
    • compute_sequence_length1
    • iqtree1
    • lofreq1
    • seqtk1
    • snpEff1
    • Show N_FILTERS more
    • Content provider
    • GTN4
    • Show N_FILTERS more
    • Keyword
    • Variant Analysis
    • Assembly5
    • prokaryote5
    • biodiversity4
    • microgalaxy4
    • Introduction to Galaxy Analyses3
    • eukaryote3
    • one-health3
    • virology3
    • VGP2
    • pacbio2
    • Genome Annotation1
    • Using Galaxy and Managing your Data1
    • annotation1
    • collections1
    • cookbook1
    • covid191
    • evolution1
    • galaxy-intro1
    • gmod1
    • jbrowse11
    • vgp1
    • Show N_FILTERS more
    • Competency level
    • Beginner2
    • Advanced1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International4
    • Show N_FILTERS more
    • Target audience
    • Students4
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko2
    • Wolfgang Maier2
    • Alex Ostrovsky1
    • Daniel Blankenberg1
    • Dave Clements1
    • Marius van den Beek1
    • Tomas Klingström1
    • Show N_FILTERS more
    • Contributor
    • Anton Nekrutenko
    • Björn Grüning15
    • Saskia Hiltemann15
    • Helena Rasche14
    • Wolfgang Maier11
    • Bérénice Batut9
    • Nicola Soranzo7
    • Niall Beard6
    • Anthony Bretaudeau3
    • Mélanie Petera3
    • Simon Gladman3
    • William Durand3
    • Gildas Le Corguillé2
    • Jasper Ouwerkerk2
    • Maria Doyle2
    • Peter van Heusden2
    • Teresa Müller2
    • Tristan Reynolds2
    • Verena Moosmann2
    • Alex Ostrovsky1
    • Alexandre Cormier1
    • Armin Dadras1
    • Beatriz Serrano-Solano1
    • Cristóbal Gallardo1
    • Ekaterina Polkh1
    • Jennifer Hillman-Jackson1
    • Jörg Wennmann1
    • Katarzyna Kamieniecka1
    • Khaled Jum'ah1
    • Linelle Abueg1
    • Lucille Delisle1
    • Martin Čech1
    • Mateo Boudet1
    • Nate Coraor1
    • Vijay1
    • Show N_FILTERS more
    • Resource type
    • e-learning4
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows3
    • Associated Training Datasets1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Tools: Galaxy

and Keywords: Variant Analysis

and Contributors: Anton Nekrutenko

4 materials found
  • ELIXIR TeSS

    e-learning

    Pox virus genome analysis from tiled-amplicon sequencing data

    ••• Advanced
    Genetic variation Variant Analysis one-health virology
  • ELIXIR TeSS

    e-learning

    Avian influenza viral strain analysis from gene segment sequencing data

    •• Intermediate
    Genetic variation Variant Analysis one-health virology
  • ELIXIR TeSS

    e-learning

    From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis

    • Beginner
    Genetic variation Variant Analysis covid19 one-health virology
  • ELIXIR TeSS

    e-learning

    Calling variants in non-diploid systems

    • Beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.