Training materials
Contributors: Anton Nekrutenko
and Related resources: Associated Training Datasets
11 materials found
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ELIXIR TeSS
e-learning
Very Short Introductions: QC
• BeginnerIntroduction to Galaxy Analyses -
ELIXIR TeSS
e-learning
Comparative gene analysis in unannotated genomes
• BeginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote … -
ELIXIR TeSS
e-learning
Calling variants in non-diploid systems
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
ELIXIR TeSS
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• IntermediateSequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio -
ELIXIR TeSS
e-learning
Making sense of a newly assembled genome
• BeginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
ELIXIR TeSS
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• IntermediateSequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio -
ELIXIR TeSS
e-learning
Unicycler Assembly
• BeginnerSequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote -
ELIXIR TeSS
e-learning
Using dataset collections
•• IntermediateUsing Galaxy and Managing your Data collections -
ELIXIR TeSS
e-learning
NGS data logistics
• BeginnerIntroduction to Galaxy Analyses -
ELIXIR TeSS
e-learning
Galaxy Basics for genomics
• BeginnerIntroduction to Galaxy Analyses galaxy-intro
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