Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly1
    • Biological sequences1
    • Community analysis1
    • Comparative transcriptomics1
    • Disease1
    • Environmental microbiology1
    • Epidemiology1
    • Exomes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Metagenomics1
    • Microbial ecology1
    • Microbiome1
    • Molecular community analysis1
    • Pathology1
    • Personal genomics1
    • Public health1
    • Public health and epidemiology1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Shotgun metagenomics1
    • Synthetic genomics1
    • Taxonomy1
    • Transcriptome1
    • Transcriptomics1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • ggplot22
    • ABRicate1
    • Apollo1
    • BCFtools1
    • BEDTools1
    • BamTools1
    • Bandage1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • DESeq21
    • Falco1
    • FastQC1
    • FastTree1
    • FeatureCounts1
    • Flye1
    • GOseq1
    • JBrowse1
    • KrakenTools1
    • MLST1
    • Medaka1
    • Minimap21
    • MultiQC1
    • NanoPlot1
    • Newick Utilities1
    • R1
    • RSeQC1
    • SAMtools1
    • fastp1
    • kraken21
    • pathview1
    • taxonomy_krona_chart1
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • cyoa
    • microgalaxy33
    • biodiversity23
    • Galaxy Server administration20
    • Assembly19
    • Genome Annotation19
    • Contributing to the Galaxy Training Material18
    • Development in Galaxy17
    • Microbiome17
    • elixir15
    • jbrowse115
    • Proteomics14
    • Statistics and machine learning14
    • gmod14
    • Using Galaxy and Managing your Data13
    • Introduction to Galaxy Analyses12
    • Transcriptomics12
    • prokaryote12
    • metagenomics11
    • work-in-progress11
    • Epigenetics10
    • Variant Analysis10
    • ansible10
    • ai-ml9
    • assembly9
    • eukaryote9
    • git-gat9
    • jupyter-notebook9
    • Sequence analysis7
    • Teaching and Hosting Galaxy training7
    • español7
    • DDA6
    • Foundations of Data Science6
    • Galaxy Community Building6
    • deutsch6
    • italiano6
    • nanopore6
    • train-the-trainers6
    • Large Language Model5
    • Single Cell5
    • collections5
    • covid195
    • metatranscriptomics5
    • plants5
    • 16S4
    • Community4
    • Computational chemistry4
    • Ecology4
    • SIG4
    • bacteria4
    • illumina4
    • interactive-tools4
    • metabarcoding4
    • one-health4
    • ChIP-seq3
    • Climate3
    • EBV dataset3
    • Genomics3
    • Metabolomics3
    • QC3
    • RAD-seq3
    • Version control3
    • amr3
    • apollo23
    • genetic composition EBV class3
    • imaging3
    • mass spectrometry imaging3
    • monitoring3
    • pacbio3
    • workflows3
    • CoDex2
    • EBV workflow2
    • HeLa2
    • Unix/Linux2
    • VGP2
    • Visualisation2
    • binning2
    • deploying2
    • essential genes2
    • eukaryota2
    • history2
    • human2
    • jobs2
    • maker2
    • metabolomics2
    • mouse2
    • storage2
    • tnseq2
    • 10x1
    • Braker31
    • Cloud computing1
    • Data management1
    • EBV workflowz1
    • Evolution1
    • FAIR1
    • FAIR Learning Objects1
    • FAIR-by-Design Learning Materials1
    • FAIR-by-Design Methodology1
    • Heatmap1
    • MIGHTS1
    • Show N_FILTERS more
    • Competency level
    • Beginner2
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut2
    • Anika Erxleben1
    • Anthony Bretaudeau1
    • Clemens Blank1
    • Engy Nasr1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Maria Doyle1
    • Mo Heydarian1
    • Nicola Soranzo1
    • Paul Zierep1
    • Pavankumar Videm1
    • Peter van Heusden1
    • Show N_FILTERS more
    • Contributor
    • Bérénice Batut
    • Saskia Hiltemann10
    • Helena Rasche9
    • Björn Grüning6
    • Wolfgang Maier3
    • Anthony Bretaudeau2
    • Cristóbal Gallardo2
    • Hans-Rudolf Hotz2
    • Jasper Ouwerkerk2
    • Lucille Delisle2
    • Mehmet Tekman2
    • Amirhossein Naghsh Nilchi1
    • Anika Erxleben1
    • Armin Dadras1
    • Clea Siguret1
    • Clemens Blank1
    • Deepti Varshney1
    • Ekaterina Polkh1
    • Engy Nasr1
    • Florian Heyl1
    • Graeme Tyson1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Maria Doyle1
    • Marius van den Beek1
    • Martin Čech1
    • Matti Hoch1
    • Mira Kuntz1
    • Niall Beard1
    • Nicola Soranzo1
    • Paul Zierep1
    • Pavankumar Videm1
    • Sanjay Kumar Srikakulam1
    • Scott Cain1
    • Simon Bray1
    • Simon Gladman1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows2
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Keywords: cyoa

and Contributors: Bérénice Batut

3 materials found
  • ELIXIR TeSS

    e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • Beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • ELIXIR TeSS

    e-learning

    Refining Genome Annotations with Apollo (eukaryotes)

    •• Intermediate
    Genomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1
  • ELIXIR TeSS

    e-learning

    Reference-based RNA-Seq data analysis

    • Beginner
    Transcriptomics QC Transcriptomics bulk collections cyoa deutsch drosophila español italiano …
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.