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• • Scientific topic
  • Comparative transcriptomics37
  • Transcriptome37
  • Transcriptomics37
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  • Algorithms31
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  • Bayesian methods28
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  • Assembly26
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  • Antimicrobial stewardship17
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• • Tool
  • Galaxy257
  • FastQC27
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  • BWA17
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  • BEDTools14
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  • ggplot29
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  • BCFtools7
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  • FreeBayes7
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  • taxonomy_krona_chart7
  • Bandage6
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  • Flye5
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  • HISAT25
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  • BLAST4
  • Bwa-mem24
  • MACS4
  • MaxQuant4
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  • SRA Software Toolkit4
  • Workflow4Metabolomics4
  • xcms4
  • Biopython3
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  • GOseq3
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  • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC3
  • OMArk3
  • Open Babel3
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  • The Protein Data Bank (PDB)3
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  • gfastats3
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  • humann3
  • kraken23
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  • Apollo2
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  • Combine Metaphlan and HUMAnN2
  • DESeq22
  • European Nucleotide Archive (ENA)2
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  • FeatureCounts2
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  • GenomeScope 2.02
  • Gromacs2
  • HUMAnN22
  • Helixer2
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• • Content provider
  • GTN431
  • ELIXIR: The Czech Republic Node1
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• • Keyword
  • Galaxy Server administration51
  • Single Cell38
  • biodiversity34
  • Proteomics27
  • Statistics and machine learning27
  • microgalaxy27
  • Using Galaxy and Managing your Data22
  • Contributing to the Galaxy Training Material21
  • Development in Galaxy21
  • Transcriptomics20
  • Assembly19
  • Genome Annotation19
  • jupyter-notebook19
  • Earth Data science16
  • Ecology16
  • Variant Analysis16
  • ansible16
  • interactive-tools16
  • Imaging15
  • jbrowse115
  • git-gat14
  • earth-system13
  • Epigenetics12
  • Introduction to Galaxy Analyses12
  • Microbiome12
  • paper-replication12
  • prokaryote12
  • FAIR Data, Workflows, and Research11
  • MIGHTS11
  • Teaching and Hosting Galaxy training11
  • gmod11
  • elixir10
  • Foundations of Data Science9
  • eukaryote9
  • work-in-progress9
  • DDA8
  • Image segmentation8
  • assembly8
  • covid198
  • ocean8
  • one-health8
  • 10x7
  • Computational chemistry7
  • fair7
  • plants7
  • workflows7
  • EBV dataset6
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  • Metabolomics6
  • Sequence analysis6
  • Visualisation6
  • cyoa6
  • data stewardship6
  • metabolomics6
  • Large Language Model5
  • ai-ml5
  • collections5
  • dmp5
  • español5
  • illumina5
  • jobs5
  • nanopore5
  • train-the-trainers5
  • transcriptomics5
  • DIA4
  • Multi-channel image4
  • Overlay4
  • QC4
  • deutsch4
  • italiano4
  • mouse4
  • single-cell4
  • storage4
  • ChIP-seq3
  • Data management3
  • FAIR3
  • GIS3
  • Galaxy Community Building3
  • Object feature extraction3
  • RAD-seq3
  • amr3
  • bacteria3
  • climate3
  • data import3
  • data management3
  • deconvolution3
  • deploying3
  • ecology3
  • eukaryota3
  • genetic composition EBV class3
  • imaging3
  • mass spectrometry imaging3
  • monitoring3
  • pacbio3
  • pangeo3
  • proteogenomics3
  • ro-crate3
  • sc_formats3
  • virology3
  • 16S2
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• • Competency level
  • Beginner345
  • Intermediate76
  • Advanced9
  • Not specified3
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• • Licence
  • Creative Commons Attribution 4.0 International432
  • Creative Commons Attribution Non Commercial No Derivatives 4.0 International1
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• • Target audience
  • Students325
  • Galaxy Administrators72
  • Instructors35
  • PhD Students1
  • Researchers1
  • life scientists1
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• • Author
  • Helena Rasche78
  • Bérénice Batut72
  • Björn Grüning49
  • Saskia Hiltemann41
  • Simon Gladman27
  • Anton Nekrutenko23
  • Nate Coraor23
  • Anthony Bretaudeau22
  • Nicola Soranzo22
  • Anne Fouilloux18
  • Yvan Le Bras17
  • Marie Josse15
  • Mehmet Tekman14
  • Cristóbal Gallardo13
  • Wendi Bacon12
  • Anup Kumar11
  • Delphine Lariviere11
  • Julia Jakiela11
  • Melanie Föll11
  • Pratik Jagtap11
  • Simon Bray11
  • Subina Mehta11
  • Fotis E. Psomopoulos10
  • Katarzyna Kamieniecka10
  • Krzysztof Poterlowicz10
  • Maria Doyle10
  • Wolfgang Maier10
  • Daniel Blankenberg9
  • Martin Čech9
  • Pavankumar Videm9
  • Anika Erxleben8
  • Dave Clements8
  • Khaled Jum'ah8
  • Marius van den Beek8
  • Matthias Fahrner8
  • Timothy J. Griffin8
  • Florian Christoph Sigloch7
  • Joachim Wolff7
  • Laura Cooper7
  • Paul Zierep7
  • Praveen Kumar7
  • Stéphanie Robin7
  • Alex Ostrovsky6
  • Anna Syme6
  • Anne Pajon6
  • Christopher Barnett6
  • Clemens Blank6
  • Emma Leith6
  • Erwan Corre6
  • John Chilton6
  • Morgan Howells6
  • Nadia Goué6
  • Alexandre Cormier5
  • Allegra Via5
  • Andrew Mason5
  • Beatriz Serrano-Solano5
  • Branka Franicevic5
  • Diana Chiang Jurado5
  • ELIXIR Goblet Train the Trainers5
  • Gildas Le Corguillé5
  • James Johnson5
  • Kellie Snow5
  • Korneel Hens5
  • Laura Leroi5
  • Leonid Kostrykin5
  • Munazah Andrabi5
  • Nick Juty5
  • Patricia Palagi5
  • Philippe Rocca-Serra5
  • Raphael Mourad5
  • Ray Sajulga5
  • Robert Andrews5
  • Sara Morsy5
  • Saskia Lawson-Tovey5
  • Xenia Perez Sitja5
  • Alireza Khanteymoori4
  • Amirhossein Naghsh Nilchi4
  • Bazante Sanders4
  • Cyril Monjeaud4
  • Lucille Delisle4
  • Mallory Freeberg4
  • Marisa Loach4
  • Mira Kuntz4
  • Riccardo Massei4
  • Solenne Correard4
  • Vivek Bhardwaj4
  • Youri Hoogstrate4
  • Belinda Phipson3
  • Daniela Schneider3
  • Dannon Baker3
  • Engy Nasr3
  • Enis Afgan3
  • Fidel Ramirez3
  • Florian Heyl3
  • Gianmauro Cuccuru3
  • Hans-Rudolf Hotz3
  • Jean-François Martin3
  • John Davis3
  • Laila Los3
  • Marie Crane3
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• • Contributor
  • Björn Grüning
  • Saskia Hiltemann596
  • Helena Rasche504
  • Bérénice Batut261
  • Nicola Soranzo180
  • Martin Čech130
  • Anthony Bretaudeau107
  • Cristóbal Gallardo104
  • Niall Beard90
  • Toby Hodges83
  • Wendi Bacon78
  • Nate Coraor71
  • François Michonneau68
  • Armin Dadras66
  • Pavankumar Videm65
  • Gildas Le Corguillé63
  • Erin Becker62
  • Marius van den Beek62
  • William Durand59
  • Zhian N. Kamvar59
  • Mine Cetinkaya-Rundel56
  • Robert Andrews55
  • Simon Gladman55
  • Katrin Leinweber53
  • Raniere Silva53
  • Tracy Teal53
  • W. Trevor King51
  • maneesha51
  • Andy Boughton50
  • Beatriz Serrano-Solano48
  • Teresa Müller48
  • Katie Anne Mills47
  • Maxim Belkin47
  • Lucille Delisle46
  • Mehmet Tekman46
  • Yvan Le Bras46
  • Canadian Bioinformatics Workshops43
  • David Pérez-Suárez43
  • Gabriel A. Devenyi43
  • Munazah Andrabi43
  • Abby Cabunoc Mayes41
  • EvanWill41
  • Ian Lee41
  • Jon Pipitone41
  • Jonah Duckles41
  • Michael Hansen41
  • Piotr Banaszkiewicz41
  • Brandon Curtis40
  • David Mawdsley40
  • Greg Wilson40
  • Jemma Stachelek40
  • Remi Rampin40
  • Allen Lee39
  • Andrew Sanchez39
  • Michael R. Crusoe39
  • James Allen38
  • Jeff Oliver38
  • Joel Nothman38
  • Nick Young38
  • Rémi Emonet38
  • naught10138
  • Marie Josse37
  • Rayna M Harris37
  • William L. Close37
  • Wolfgang Maier36
  • Melanie Föll35
  • Sarah Brown35
  • Anup Kumar34
  • Gerard Capes33
  • Maria Doyle33
  • Renato Alves31
  • trk30
  • Ana Conrado29
  • Stephan Druskat29
  • Christina K.28
  • K.E. Koziar28
  • Simon Bray28
  • Subina Mehta28
  • Alex Whan27
  • Anne Fouilloux26
  • Paula Andrea Martinez26
  • Michael Joseph25
  • Anthony Gitter24
  • Geert van Geest24
  • João Rodrigues24
  • Peter van Heusden24
  • Donny Vrins23
  • Robert Davey22
  • Sarah Stevens22
  • Tristan Reynolds21
  • Wolmar Nyberg Åkerström21
  • actions-user21
  • Henry Schreiner20
  • Hilmar Lapp20
  • Julia Jakiela20
  • Leonid Kostrykin20
  • Bazante Sanders19
  • The Gulbenkian Training Programme in Bioinformatics19
  • Anton Nekrutenko18
  • Elin Kronander18
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• • Resource type
  • e-learning350
  • slides82
  • Slides1
  • Training materials1
  • course materials1
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• • Related resource
  • Associated Workflows226
  • Associated Training Datasets225
  • Jupyter Notebook (with Solutions)19
  • Jupyter Notebook (without Solutions)19
  • Quarto/RMarkdown Notebook2
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• • Node
  • Czech Republic1
  • Germany1
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• • Collection
  • ELIXIR hCNV community - collection of courses and materials.1
  • ELIXIR Biodiversity Community1
  • ELIXIR Federated Human Data Community1
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