Training materials
12 materials found
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ELIXIR TeSS
e-learning
ERGA post-assembly QC
• BeginnerSequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants -
ELIXIR TeSS
slides
Introduction to Genome Annotation
•• IntermediateGenomics Genome Annotation -
ELIXIR TeSS
e-learning
Large genome assembly and polishing
• BeginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing -
ELIXIR TeSS
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
ELIXIR TeSS
e-learning
From small to large-scale genome comparison
• BeginnerGenomics Genome Annotation plants prokaryote -
ELIXIR TeSS
e-learning
Masking repeats with RepeatMasker
• BeginnerGenomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote -
ELIXIR TeSS
e-learning
Genome annotation with Funannotate
•• IntermediateGenomics Gene and protein families Genome Annotation biodiversity eukaryote gmod jbrowse1 -
ELIXIR TeSS
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• BeginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
ELIXIR TeSS
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• IntermediateSequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio -
ELIXIR TeSS
e-learning
Genome assembly using PacBio data
•• IntermediateSequence assembly Genomics Biodiversity Assembly assembly biodiversity pacbio
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