Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Microbial physiology
    • Comparative transcriptomics18
    • Transcriptome18
    • Transcriptomics18
    • Algorithms17
    • Computer programming17
    • Data structures17
    • Programming languages17
    • Software development17
    • Software engineering17
    • Assembly9
    • Biological sequences9
    • Sequence analysis9
    • Sequence assembly9
    • Sequence databases9
    • DNA variation8
    • Epigenomics8
    • Genetic variation8
    • Genomic variation8
    • Mutation8
    • Polymorphism8
    • Somatic mutations8
    • Exomes7
    • Genome annotation7
    • Genomes7
    • Genomics7
    • Personal genomics7
    • Synthetic genomics7
    • Viral genomics7
    • Whole genomes7
    • Bottom-up proteomics6
    • Discovery proteomics6
    • MS-based targeted proteomics6
    • MS-based untargeted proteomics6
    • Metaproteomics6
    • Peptide identification6
    • Protein and peptide identification6
    • Proteomics6
    • Quantitative proteomics6
    • Targeted proteomics6
    • Top-down proteomics6
    • Antimicrobial stewardship5
    • Medical microbiology5
    • Microbial genetics5
    • Microbial surveillance5
    • Microbiological surveillance5
    • Microbiology5
    • Molecular infection biology5
    • Molecular microbiology5
    • Biodiversity4
    • Community analysis3
    • Computational ecology3
    • Ecoinformatics3
    • Ecological informatics3
    • Ecology3
    • Ecosystem science3
    • Environmental microbiology3
    • Metagenomics3
    • Microbial ecology3
    • Microbiome3
    • Molecular community analysis3
    • Shotgun metagenomics3
    • Taxonomy3
    • DNA metabarcoding2
    • DNA polymorphism2
    • Environmental metabarcoding2
    • Metabarcoding2
    • Microsatellites2
    • RFLP2
    • RNA metabarcoding2
    • SNP2
    • Single nucleotide polymorphism2
    • VNTR2
    • Variable number of tandem repeat polymorphism2
    • eDNA metabarcoding2
    • eRNA metabarcoding2
    • snps2
    • Bayesian methods1
    • Biostatistics1
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • Content management1
    • Data management1
    • Database management1
    • Descriptive statistics1
    • Document management1
    • File management1
    • Gaussian processes1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Genetic linkage1
    • Inferential statistics1
    • Informatics1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • BEDTools1
    • BWA1
    • BamTools1
    • Circos1
    • FastQC1
    • FreeBayes1
    • Galactic Circos1
    • JBrowse1
    • Unicycler1
    • Vcflib1
    • compute_sequence_length1
    • snippy1
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • Show N_FILTERS more
    • Keyword
    • microgalaxy5
    • prokaryote5
    • gmod3
    • jbrowse13
    • Assembly2
    • Variant Analysis2
    • Genome Annotation1
    • biodiversity1
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko3
    • Simon Gladman3
    • Anna Syme2
    • Delphine Lariviere2
    • Torsten Seemann2
    • Alex Ostrovsky1
    • Helena Rasche1
    • Show N_FILTERS more
    • Contributor
    • Nicola Soranzo
    • Saskia Hiltemann15
    • Björn Grüning14
    • Bérénice Batut14
    • Helena Rasche13
    • Anthony Bretaudeau12
    • Niall Beard5
    • Tristan Reynolds5
    • Anton Nekrutenko3
    • Bazante Sanders3
    • Maria Doyle3
    • Miaomiao Zhou3
    • Teresa Müller3
    • Wolfgang Maier3
    • Clea Siguret2
    • Cristóbal Gallardo2
    • Deepti Varshney2
    • Delphine Lariviere2
    • Gildas Le Corguillé2
    • Nate Coraor2
    • Paul Zierep2
    • Peter van Heusden2
    • Simon Gladman2
    • Verena Moosmann2
    • William Durand2
    • pimarin2
    • Alex Ostrovsky1
    • Anna Syme1
    • Christoph Stritt1
    • Enis Afgan1
    • Jennifer Hillman-Jackson1
    • Matúš Kalaš1
    • Mélanie Petera1
    • Vijay1
    • Willem de Koning1
    • mmiladi1
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets5
    • Associated Workflows5
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Scientific topics: Microbial physiology

and Competency level: Beginner

and Contributors: Nicola Soranzo

5 materials found
  • ELIXIR TeSS

    e-learning

    Calling variants in non-diploid systems

    • Beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • ELIXIR TeSS

    e-learning

    Microbial Variant Calling

    • Beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy …
  • ELIXIR TeSS

    e-learning

    Genome annotation with Prokka

    • Beginner
    Genomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote
  • ELIXIR TeSS

    e-learning

    Making sense of a newly assembled genome

    • Beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • ELIXIR TeSS

    e-learning

    Unicycler Assembly

    • Beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.