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- Data handling51
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- Data extraction16
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- Alignment1
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- Exome variant detection1
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- Galaxy283
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- European Nucleotide Archive (ENA)5
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- Galaxy Image Analysis5
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- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- Ontology Lookup Service5
- Salmon5
- Unicycler5
- anndata5
- kraken25
- BUSCO4
- Bowtie 24
- Chipster4
- DESeq24
- Diamond4
- HISAT24
- KrakenTools4
- MACS4
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- Workflow4Metabolomics4
- annotatemyids4
- bx-python4
- mothur4
- scikit-image4
- seqtk4
- snpEff4
- BCFtools3
- Bracken3
- Bwa-mem23
- Clustal 1.8 (Clustal W, Clustal X)3
- DropletUtils3
- GOseq3
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- humann3
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- Bakta2
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- BridgeDbR2
- Cardinal2
- CellProfiler2
- ChIPpeakAnno2
- Combine Metaphlan and HUMAnN2
- FASTQE2
- FastTree2
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- GOEnrichment2
- GenomeScope 2.02
- HUMAnN22
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- FAIRsharing5
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- Common Workflow Language2
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- Ontology Lookup Service2
- PRoteomics IDEntifications database2
- Wheat Data Interoperability Guidelines 1
- Bioschemas1
- Cellosaurus1
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- Investigation Study Assay Tabular1
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- ModelArchive1
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- Plant Phenotype Experiment Ontology1
- Research Object Crate1
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- STRING: functional protein association networks1
- Schema.org1
- Search Tool for Interactions of Chemicals1
- Simplified Molecular Input Line Entry Specification Format1
- The European Genome-phenome Archive1
- The Human Metabolome Database1
- The Observational Medical Outcomes Partnership Common Data Model1
- UniProt Knowledgebase1
- Wheat Trait Ontology1
- Wikidata1
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- GTN562
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- VIB Training & Conferences18
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- ELIXIR13
- ELIXIR Estonia10
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- ELIXIR-SI eLearning Platform (EeLP)5
- Glittr.org5
- European Bioinformatics Institute (EBI)4
- NanoCommons4
- University of Cambridge Bioinformatics Training4
- Centre for Genomic Regulation (CRG)3
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- BioData.pt2
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- InterMine2
- Pattern Institute2
- PerMedCoE2
- Bioconductor1
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- Keyword
- Galaxy Server administration66
- Development in Galaxy45
- Single Cell39
- FAIR37
- biodiversity37
- microgalaxy33
- Foundations of Data Science32
- data management32
- Ecology30
- Microbiome29
- Statistics and machine learning29
- Transcriptomics29
- jupyter-notebook29
- training29
- Contributing to the Galaxy Training Material26
- FAIR Data, Workflows, and Research24
- FAIR principles22
- FAIR data21
- Genome Annotation21
- Metadata21
- Proteomics20
- ansible20
- Assembly19
- Using Galaxy and Managing your Data19
- Python18
- git-gat18
- Climate17
- Open Science17
- fair17
- Data analysis16
- Data management16
- HemaFAIR16
- Introduction to Galaxy Analyses16
- Teaching and Hosting Galaxy training16
- interactive-tools16
- Research Data Management15
- data stewardship15
- earth-system15
- Data management plan14
- Data management planning13
- Epigenetics13
- FAIR Data13
- metagenomics13
- prokaryote13
- work-in-progress13
- DMP12
- Data reuse12
- Data sharing12
- Roslin Institute12
- Variant Analysis12
- paper-replication12
- CONVERGE11
- European research projects11
- MIGHTS11
- Ontologies11
- Sequence analysis11
- metadata11
- Bioinformatics10
- ELIXIR-CONVERGE10
- Standards10
- genes and genomes10
- ocean10
- plants10
- research data management10
- Workflows9
- cyoa9
- transcriptomics9
- Clinical data8
- Evolution8
- Galaxy Community Building8
- Imaging8
- Metabolomics8
- Programming8
- assembly8
- data visualisation8
- español8
- gmod8
- label-free8
- medicine and health8
- nanopore8
- reproducibility8
- 10x7
- DDA7
- Data Management7
- EBV dataset7
- EBV workflow7
- Interoperability7
- R7
- Reproducibility7
- SARS-CoV-27
- data management plan7
- dmp7
- ecology7
- jbrowse17
- metabarcoding7
- next generation sequencing7
- programming7
- 16S6
- Computational modelling6
- DMP tools6
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- Competency level
- Beginner
- Not specified9165
- Intermediate299
- Advanced47
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- Licence
- Creative Commons Attribution 4.0 International725
- License Not Specified111
- Creative Commons Attribution Share Alike 4.0 International46
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- MIT License12
- Other (Not Open)12
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International10
- Creative Commons Zero v1.0 Universal6
- Apache License 2.05
- Creative Commons Attribution 1.0 Generic5
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- Creative Commons Attribution No Derivatives 4.0 International3
- GNU General Public License v3.0 only2
- Other (Open)2
- Creative Commons Attribution Non Commercial 2.0 Generic1
- GNU General Public License v2.0 only1
- Open Data Commons Attribution License v1.01
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- Target audience
- Students432
- Galaxy Administrators111
- Researchers51
- Instructors50
- PhD candidate27
- Biologists25
- Data stewards23
- Life Science Researchers22
- PhD candidates20
- PhD students19
- Bioinformaticians18
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- PhD Students17
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- Data managers16
- bioinformaticians14
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- Beginner9
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- Scientific community6
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- biologists6
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- Chemists5
- ExPaNDS and PaNOSC project members5
- modelers5
- project manager5
- research data engineer5
- All postgraduates4
- Anyone wishing to use bioinformatics resources to find basic information about a virus.4
- Biologists with little or no prior computational experience4
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- Biologists, Genomicists, Computer Scientists3
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- Undergraduate students3
- beginner bioinformaticians3
- biocurators3
- data curator3
- engineers3
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- life scientists3
- Anyone interested in data standardization and/or the ontology approach (i.e. public, end users).2
- Bioinformaticians, Biologists with little or no prior computational experience.2
- Clinical Scientists2
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- Patient Advocates 2
- PhD2
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members2
- PhD Students or young researchers in molecular biology and/or genetics with little or no background in bioinformatics.2
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- Author
- Helena Rasche94
- Bérénice Batut93
- Saskia Hiltemann54
- SIB Swiss Institute of Bioinformatics50
- Björn Grüning42
- Simon Gladman30
- Yvan Le Bras27
- Nate Coraor25
- Nicola Soranzo24
- Anton Nekrutenko23
- John Chilton23
- Marie Josse19
- Subina Mehta19
- Wendi Bacon18
- Katarzyna Kamieniecka17
- Krzysztof Poterlowicz17
- Anne Fouilloux16
- Anthony Bretaudeau16
- Fotis E. Psomopoulos15
- Mehmet Tekman15
- Paul Zierep15
- Bazante Sanders14
- Mijke Jetten14
- Monique Zahn14
- Julia Jakiela13
- Maria Doyle13
- The Carpentries13
- Anup Kumar12
- Katherine Do12
- Korbinian Bösl11
- Pavankumar Videm11
- Cristóbal Gallardo10
- Dave Clements10
- Donny Vrins10
- Khaled Jum'ah10
- Martin Čech10
- Celia van Gelder9
- Delphine Lariviere9
- Egon Willighagen9
- Federico Bianchini9
- James Johnson9
- Marius van den Beek9
- Personalized Health Informatics Group9
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- Daniel Blankenberg8
- Geert van Geest8
- Helen Brown8
- Kaivan Kamali8
- Lucille Delisle8
- Robert Andrews8
- Wandrille Duchemin8
- Branka Franicevic7
- Diana Pilvar7
- Joachim Wolff7
- Laura Cooper7
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- Pratik Jagtap7
- Sergio Martínez Cuesta7
- Wolfgang Maier7
- Alexander Botzki6
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- Andrew Mason6
- Anna Syme6
- Anne Pajon6
- Clemens Blank6
- Coline Royaux6
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- Michael Charleston6
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- Philippe Rocca-Serra6
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- Alex Ostrovsky5
- Alexandre Cormier5
- Dechen Bhuming5
- Deepak Tanwar5
- Diana Chiang Jurado5
- Donat Agosti5
- Emma Leith5
- Erwan Corre5
- Gildas Le Corguillé5
- Heleri Inno5
- Hélène Chiapello5
- Julia Giora5
- Kellie Snow5
- Korneel Hens5
- Laura Leroi5
- Marie-Claude Blatter5
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- Mira Kuntz5
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- Saskia Hiltemann473
- Helena Rasche413
- Björn Grüning344
- Bérénice Batut199
- Nicola Soranzo157
- Martin Čech117
- Cristóbal Gallardo90
- Niall Beard83
- Anthony Bretaudeau77
- Nate Coraor66
- Wendi Bacon65
- Armin Dadras58
- Pavankumar Videm56
- Gildas Le Corguillé55
- William Durand54
- Simon Gladman50
- Marius van den Beek46
- Mehmet Tekman44
- Yvan Le Bras43
- Lucille Delisle42
- Teresa Müller42
- Marie Josse37
- Beatriz Serrano-Solano29
- Wolfgang Maier26
- Maria Doyle22
- Anne Fouilloux21
- Anup Kumar21
- Julia Jakiela20
- Tristan Reynolds19
- Khaled Jum'ah16
- Melanie Föll16
- Petros Kountouris16
- Subina Mehta16
- Marisa Loach15
- Paul Zierep15
- Pratik Jagtap15
- Simon Bray15
- Deepti Varshney14
- Bazante Sanders13
- Daniela Schneider13
- David López13
- Donny Vrins13
- Mira Kuntz13
- Anton Nekrutenko12
- Delphine Lariviere12
- Matthias Bernt12
- Pablo Moreno12
- Timothy J. Griffin12
- Gianmauro Cuccuru11
- Mélanie Petera11
- Peter van Heusden11
- Katarzyna Kamieniecka10
- Paul De Geest9
- Elin Kronander8
- Hans-Rudolf Hotz8
- John Chilton8
- Kaivan Kamali8
- Leonid Kostrykin8
- Verena Moosmann8
- Wolmar Nyberg Åkerström8
- Amirhossein Naghsh Nilchi7
- Anna Syme7
- Diana Chiang Jurado7
- Florian Heyl7
- Katherine Do7
- Markus Englund7
- Mattias Strömberg7
- Melissa Burke7
- Morgan Howells7
- Niclas Jareborg7
- Sabine Österle7
- Stephan Nylinder7
- Tomas Klingström7
- Yvonne Kallberg7
- Alexandre Cormier6
- Dave Clements6
- Ekaterina Polkh6
- Erik Hedman6
- Mallory Freeberg6
- Solenne Correard6
- Alex Ostrovsky5
- Alireza Khanteymoori5
- Bert Droesbeke5
- Catherine Bromhead5
- Enis Afgan5
- John Davis5
- Stéphanie Robin5
- Vassilios Ioannidis5
- Andrea Bagnacani4
- Clea Siguret4
- Coline Royaux4
- Daniel Sobral4
- Dave B.4
- Eli Chadwick4
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- Associated Training Datasets259
- Associated Workflows235
- Jupyter Notebook (with Solutions)28
- Jupyter Notebook (without Solutions)28
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- DMPs for Photon and Neutron RIs1
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- Ready For BioData Management?1
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- Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle1
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- HemaFAIR Training: Applying FAIR Principles in Hematology Research16
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- Elements of Data Management5
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- SARS-CoV-2 : Studying a new virus5
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