Training materials
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ELIXIR TeSS
e-learning
Comparison of two annotation tools - Helixer and Braker3
•• IntermediateGenomics Sequence assembly Braker3 Genome Annotation Helixer biodiversity eukaryota jbrowse1 -
ELIXIR TeSS
e-learning
Annotate, prepare tests and publish Galaxy workflows in workflow registries
•• IntermediateFAIR Using Galaxy and Managing your Data workflows -
ELIXIR TeSS
e-learning
Molecular formula assignment and mass recalibration with MFAssignR package
•• IntermediateMetabolomics Metabolomics exposomics gc-ms lc-ms metabolomics -
ELIXIR TeSS
e-learning
Voronoi segmentation
•• IntermediateImaging Image segmentation Imaging Multi-channel image Object counting Overlay Tessellation -
ELIXIR TeSS
Perl One-liner - Genotoul-bioinfo
•• Intermediatehttp://edamontology.org/topic_3316 -
ELIXIR TeSS
e-learning
Fine-tuning a LLM for DNA Sequence Classification
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Pretraining a Large Language Model (LLM) from Scratch on DNA Sequences
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Predicting Mutation Impact with Zero-shot Learning using a pretrained DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Generating Artificial Yeast DNA Sequences using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Optimizing DNA Sequences for Biological Functions using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook work-in-progress