Training materials
Competency level: Intermediate
and Licence: Creative Commons Attribution 4.0 International
170 materials found
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ELIXIR TeSS
hands-on tutorial
Containerise data analysis with Docker and Apptainer
•• IntermediateDocker image Software engineering Apptainer Computing environment Container Docker -
ELIXIR TeSS
e-learning
Content Tracking and Verification in Galaxy Workflows with ISCC-SUM
•• IntermediateImaging Data handling Data management Data sharing Imaging Validation -
ELIXIR TeSS
e-learning
Execute a BiaPy workflow in Galaxy
•• IntermediateImaging 3D image Conversion Deep learning Image annotation Image segmentation Imaging Overlay Volume rendering -
ELIXIR TeSS
e-learning
GLEAM Image Learner - Validating Skin Lesion Classification on HAM10000
•• IntermediateStatistics and probability Deep Learning HAM10000 Dataset Image Classification Image Learner Skin Lesion Classification Statistics and machine learning -
ELIXIR TeSS
youtube video, Series of videos, Presentation, tutorials
8th Advanced in silico Drug Design workshop lectures
•• IntermediateDrug discovery Computational biology Computational chemistry Molecular modelling Molecular dynamics Pharmacology Proteins Drug development in silico drug design Drug-like molecules … -
ELIXIR TeSS
e-learning
Galaxy Tabular Learner - Building a Model using Chowell clinical data
•• IntermediateStatistics and probability LORIS Score Model Machine Learning Statistics and machine learning Tabular Learner -
ELIXIR TeSS
e-learning
Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome assembly binning metagenomics microgalaxy -
ELIXIR TeSS
youtube video, Series of videos, slideck/ presentation, tutorials
7th Advanced in silico Drug Design workshop lectures
•• IntermediateDrug discovery Computational biology Computational chemistry Molecular modelling Molecular dynamics Pharmacology Proteins in silico drug design, Drug design, Drug discovery, Drug screening, pharmacophore, chemical biology, QSAR, Molecular docking, molecular modelling, PDBe, PDBe-KB, ChEMBL, De novo, deep learning, cheminformatics, AlphaFold, Quantum mechanics/molecular mechanics -
ELIXIR TeSS
Video
Biodiversity Genomics Europe + SciLifeLab HiC Course
•• IntermediateHiC Genome Assembly Genome Sequencing Epigenomics Laboratory Technique -
ELIXIR TeSS
e-learning
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
•• IntermediateImaging Conversion Imaging Multi-channel image Object feature extraction ROI selection