Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • CWL5
    • Common Workflow Language5
    • CommonWL5
    • Pipelines3
    • Software integration3
    • Tool integration3
    • Tool interoperability3
    • Workflows3
    • Variant pattern analysis2
    • Chromosome walking1
    • Clone verification1
    • Comparative transcriptomics1
    • DNA-Seq1
    • DNase-Seq1
    • Exomes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • High throughput sequencing1
    • High-throughput sequencing1
    • NGS1
    • NGS data analysis1
    • Next gen sequencing1
    • Next generation sequencing1
    • Panels1
    • Personal genomics1
    • Primer walking1
    • Sanger sequencing1
    • Sequencing1
    • Synthetic genomics1
    • Targeted next-generation sequencing panels1
    • Transcriptome1
    • Transcriptomics1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Content provider
    • Glittr.org5
    • Australian BioCommons1
    • Show N_FILTERS more
    • Keyword
    • R313
    • Transcriptomics149
    • Genomics135
    • Python132
    • Next generation sequencing115
    • RNA-seq113
    • Bioinformatics83
    • Data management80
    • Statistics75
    • Galaxy Server administration68
    • Machine learning64
    • Data science63
    • Unix/Linux60
    • Single-cell sequencing59
    • FAIR data58
    • Reproducibility56
    • jupyter-notebook54
    • Foundations of Data Science51
    • Proteomics49
    • Version control49
    • Variant analysis48
    • Data visualization47
    • biodiversity47
    • Workflows46
    • Development in Galaxy45
    • Statistics and machine learning43
    • Single Cell42
    • Genome assembly41
    • microgalaxy41
    • General36
    • Genome annotation36
    • Genome Annotation32
    • training31
    • Ecology30
    • Metagenomics30
    • Microbiome29
    • programming29
    • Using Galaxy and Managing your Data28
    • Assembly27
    • Contributing to the Galaxy Training Material27
    • Nextflow27
    • Epigenetics26
    • Long read sequencing26
    • FAIR24
    • metagenomics24
    • Containerization22
    • Spatial transcriptomics22
    • Docker21
    • Shiny21
    • ansible21
    • High performance computing20
    • Imaging20
    • reproducible research20
    • CfRR19
    • ChIP-seq19
    • Microbiology19
    • git-gat19
    • scientific computing19
    • Artificial intelligence18
    • Variant Analysis18
    • interactive-tools18
    • Climate17
    • Comparative genomics17
    • Metabolomics17
    • Teaching and Hosting Galaxy training17
    • work-in-progress17
    • FAIR Data, Workflows, and Research16
    • Galaxy16
    • Introduction to Galaxy Analyses16
    • Sequence analysis16
    • jbrowse116
    • prokaryote16
    • earth-system15
    • elixir15
    • gmod15
    • Image analysis14
    • Quarto14
    • ATAC-seq13
    • Pathways and Networks13
    • Shell13
    • data management13
    • Cloud computing12
    • Enrichment analysis12
    • Introduction12
    • Programming12
    • assembly12
    • cyoa12
    • paper-replication12
    • transcriptomics12
    • Analysis11
    • Deep learning11
    • Introduction bioinformatics11
    • MIGHTS11
    • Multiomics11
    • Rmarkdown11
    • Snakemake11
    • bioinformatics11
    • covid1911
    • fair11
    • Evolution10
    • Show N_FILTERS more
    • Competency level
    • Not specified6
    • Show N_FILTERS more
    • Licence
    • License Not Specified4
    • Creative Commons Attribution 4.0 International1
    • MIT License1
    • Show N_FILTERS more
    • Author
    • Biodata Analysis Group1
    • Hall, Grace1
    • Lupat, Richard1
    • Qian Liu1
    • The Carpentries Incubator1
    • The Griffith Lab1
    • Workflow Languages in R1
    • Show N_FILTERS more
    • Contributor
    • Fotis E. Psomopoulos2
    • Qian Liu2
    • qhu2
    • Abby Cabunoc Mayes1
    • Aedin Culhane1
    • Alex Whan1
    • Alexandru Mahmoud1
    • Allen Lee1
    • Ana Conrado1
    • Andrew Sanchez1
    • Andy Boughton1
    • Anne Luesink1
    • Anthony Gitter1
    • Arthur1
    • Brandon Curtis1
    • Bryan Cosca1
    • Chris Miller1
    • Christina K.1
    • David Mawdsley1
    • David Pérez-Suárez1
    • Douglas Lowe1
    • Erin Becker1
    • EvanWill1
    • Florian Hoedt1
    • François Michonneau1
    • Gabriel A. Devenyi1
    • Gerard Capes1
    • Greg Wilson1
    • Henry Schreiner1
    • Huiming Xia1
    • Ian Lee1
    • James Allen1
    • Jeff Oliver1
    • Jemma Stachelek1
    • Joel Nothman1
    • Jon Pipitone1
    • Jonah Duckles1
    • João Rodrigues1
    • K.E. Koziar1
    • Kartik Singhal1
    • Katie Anne Mills1
    • Katrin Leinweber1
    • Kelsy Cotto1
    • Kevin Rue-Albrecht1
    • Kilian Lieret1
    • Konstantinos Kyritsis1
    • Kostis Zagganas1
    • Kozo Nishida1
    • Levi Waldron1
    • Malachi Griffith1
    • Marcel Ramos Pérez1
    • Mariam Khanfar1
    • Maxim Belkin1
    • Michael Hansen1
    • Michael Joseph1
    • Michael R. Crusoe1
    • My Hoang1
    • Nick Young1
    • Nikos Pechlivanis1
    • Obi Griffith1
    • Oliver Woolland1
    • Paola Prieto1
    • Paula Andrea Martinez1
    • Pedro L Fernandes1
    • Piotr Banaszkiewicz1
    • Raniere Silva1
    • Rayna M Harris1
    • Remi Rampin1
    • Renato Alves1
    • Rémi Emonet1
    • Sarah Brown1
    • Sean Davis1
    • Sehrish Kanwal1
    • Stephan Druskat1
    • Stian Soiland-Reyes1
    • Thanasis Vergoulis1
    • Thomas B. Mooney1
    • Toby Hodges1
    • Tom1
    • Tracy Teal1
    • W. Trevor King1
    • William L. Close1
    • Zachary Skidmore1
    • Zhian N. Kamvar1
    • ebarnell1
    • fgomez021
    • jeszyman1
    • maneesha1
    • naught1011
    • trk1
    • Show N_FILTERS more
    • Node
    • Switzerland5
    • Show N_FILTERS more
    • Status
    • Active1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Hide archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Register training material

Keywords: CWL

and User: scraper

and Include archived: true

6 materials found
  • rworkflow/RcwlWorkshop

    ELIXIR node event
    Workflows CWL Variant pattern analysis R CWL Workflows Variant analysis
  • BiodataAnalysisGroup/intro-to-cwl-docker

    ELIXIR node event
    Workflows CWL Workflows CWL Containerization Docker
  • Liubuntu/Bioc2020RCWL

    ELIXIR node event
    CWL R CWL
  • carpentries-incubator/cwl-novice-tutorial

    ELIXIR node event
    Workflows CWL Workflows CWL Containerization
  • griffithlab/pmbio.org

    ELIXIR node event
    Genomics Sequencing Transcriptomics Variant pattern analysis CWL Next generation sequencing Genomics Transcriptomics Variant analysis CWL
  • WORKSHOP: Translating workflows into Nextflow with Janis

    Bioinformatics Workflows Nextflow CWL Galaxy
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.