Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Algorithms108
    • Computer programming108
    • Data structures108
    • Programming languages108
    • Software development108
    • Software engineering108
    • FAIR data101
    • Findable, accessible, interoperable, reusable data101
    • Data management94
    • Metadata management94
    • Research data management (RDM)94
    • Genome annotation83
    • Exomes75
    • Genomes75
    • Genomics75
    • Personal genomics75
    • Synthetic genomics75
    • Viral genomics75
    • Whole genomes75
    • Biodiversity71
    • Comparative transcriptomics67
    • Transcriptome67
    • Transcriptomics67
    • Bayesian methods55
    • Biostatistics55
    • Descriptive statistics55
    • Gaussian processes55
    • Inferential statistics55
    • Markov processes55
    • Multivariate statistics55
    • Probabilistic graphical model55
    • Probability55
    • Statistics55
    • Statistics and probability55
    • Bioinformatics45
    • Bottom-up proteomics42
    • Discovery proteomics42
    • MS-based targeted proteomics42
    • MS-based untargeted proteomics42
    • Metaproteomics42
    • Peptide identification42
    • Protein and peptide identification42
    • Proteomics42
    • Quantitative proteomics42
    • Targeted proteomics42
    • Top-down proteomics42
    • Metagenomics41
    • Shotgun metagenomics41
    • Biological sequences36
    • Sequence analysis36
    • Sequence databases36
    • Assembly34
    • Community analysis34
    • Environmental microbiology34
    • Microbial ecology34
    • Microbiome34
    • Molecular community analysis34
    • Sequence assembly34
    • Computational ecology30
    • Ecoinformatics30
    • Ecological informatics30
    • Ecology30
    • Ecosystem science30
    • Diffraction experiment28
    • Imaging28
    • Microscopy28
    • Microscopy imaging28
    • Optical super resolution microscopy28
    • Photonic force microscopy28
    • Photonic microscopy28
    • Data mining25
    • Pattern recognition25
    • Antimicrobial stewardship22
    • Medical microbiology22
    • Microbial genetics22
    • Microbial physiology22
    • Microbial surveillance22
    • Microbiological surveillance22
    • Microbiology22
    • Molecular infection biology22
    • Molecular microbiology22
    • DNA variation21
    • Genetic variation21
    • Genomic variation21
    • Mutation21
    • Polymorphism21
    • Somatic mutations21
    • Taxonomy19
    • Active learning18
    • Ensembl learning18
    • Kernel methods18
    • Knowledge representation18
    • Machine learning18
    • Neural networks18
    • Recommender system18
    • Reinforcement learning18
    • Supervised learning18
    • Unsupervised learning18
    • Open science17
    • Epigenomics14
    • Show N_FILTERS more
    • Operation
    • Annotation1
    • Data formatting1
    • Data reformatting1
    • File format conversion1
    • File formatting1
    • File reformatting1
    • Format conversion1
    • Show N_FILTERS more
    • Tool
    • BUSCO2
    • Galaxy2
    • JBrowse2
    • OMArk2
    • gffread2
    • Helixer1
    • STAR1
    • Show N_FILTERS more
    • Standard database or policy
    • Minimum Information about Plant Phenotyping Experiment1
    • Show N_FILTERS more
    • Content provider
    • GTN2
    • IFB French Institute of Bioinformatics1
    • Show N_FILTERS more
    • Keyword
    • Genome Annotation2
    • biodiversity2
    • eukaryota2
    • jbrowse12
    • Data-format1
    • Braker31
    • Data sharing1
    • Pangenome1
    • Plant Phenotyping1
    • Quality Control1
    • Visualization1
    • data sharing1
    • helixer1
    • plant science1
    • Show N_FILTERS more
    • Competency level
    • Beginner2
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International
    • License Not Specified6
    • Creative Commons Attribution Non Commercial No Derivatives 4.0 International2
    • Academic Free License v3.01
    • Show N_FILTERS more
    • Target audience
    • Students2
    • plant researchers2
    • Biologists1
    • data curators1
    • database managers1
    • geneticists1
    • genomics researchers1
    • software engineers1
    • tool developers1
    • Show N_FILTERS more
    • Author
    • Anthony Bretaudeau2
    • Romane LIBOUBAN2
    • Anne-Françoise Adam-Blondon1
    • Cyril Pommier1
    • Célia Michotey1
    • Daniel Faria1
    • Elizabeth Arnaud1
    • Evangelia Papoutsoglou1
    • Keywan Hassani-Pak1
    • Klaas Vandepoele1
    • Marc Christian Heuermann1
    • Marko Petek1
    • Michiel Van Bel1
    • Patrick König1
    • Pedro Barros1
    • Sander Thierens1
    • Uwe Scholz1
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau2
    • Björn Grüning2
    • Bérénice Batut2
    • Saskia Hiltemann2
    • Deepti Varshney1
    • Felicitas Kindel1
    • Helena Rasche1
    • Romane LIBOUBAN1
    • Tristan Reynolds1
    • Show N_FILTERS more
    • Resource type
    • e-learning2
    • Presentation1
    • Training materials1
    • Video1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets2
    • Associated Workflows2
    • Ready For BioData Management?1
    • Show N_FILTERS more
    • Node
    • Portugal2
    • Belgium1
    • France1
    • Germany1
    • Netherlands1
    • Slovenia1
    • United Kingdom1
    • Show N_FILTERS more
    • Status
    • Active1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Hide materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Scientific topics: Botany

and Licence: Creative Commons Attribution 4.0 International

and Include broken links: true

4 materials found
  • ELIXIR TeSS

    Presentation, Video

    E-PAN Workshop 2026 | Enhancing Pan-Genome Analysis in Plants

    ELIXIR node event
    • Beginner
    Plant biology Genomics FAIR data Pangenome Visualization Quality Control Data sharing plant science
  • ELIXIR TeSS

    e-learning

    Genome annotation with Braker3

    •• Intermediate
    Genomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1
  • ELIXIR TeSS

    e-learning

    Genome annotation with Helixer

    •• Intermediate
    Genomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1
  • ELIXIR TeSS

    Training materials

    Plant Phenotyping Data managment (MIAPPE)

    ELIXIR node event
    • Beginner
    Phenomics Plant biology Data management Annotation Data formatting Plant Phenotyping Data-format data sharing
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.