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- Algorithms70
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- Exomes49
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- Biodiversity43
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- Bottom-up proteomics39
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- Protein structure12
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- Operation
- Data extraction3
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- Galaxy328
- FastQC27
- SAMtools21
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- BEDTools14
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- BLAST11
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- BCFtools7
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- HISAT27
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- BamTools6
- Biopython6
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- Flye6
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- Open Babel6
- seqtk6
- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- SRA Software Toolkit5
- Workflow4Metabolomics5
- anndata5
- annotatemyids5
- compute_sequence_length5
- gffread5
- kraken25
- Bowtie 24
- Bwa-mem24
- Diamond4
- GOseq4
- Galactic Circos4
- KrakenTools4
- MSstats4
- MetaPhlAn4
- Newick Utilities4
- RSeQC4
- StringTie4
- The Protein Data Bank (PDB)4
- Trim Galore4
- UniProt4
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- bx-python4
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- mothur4
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- Bakta3
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- CellProfiler3
- DESeq23
- DropletUtils3
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- GenomeScope 2.03
- InterProScan (EBI)3
- MACS3
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- OMArk3
- QualiMap3
- RDKit3
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- Vcflib3
- bed to protein map3
- customProDB3
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- iqtree3
- lofreq3
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- snpEff3
- Apollo2
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- COMBAT-TB Workbench2
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- Circos2
- Clustal 1.8 (Clustal W, Clustal X)2
- European Nucleotide Archive (ENA)2
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- Standard database or policy
- Ontology Lookup Service2
- Cellosaurus1
- DisProt1
- ModelArchive1
- PRoteomics IDEntifications database1
- Resource Identification Portal 1
- The European Genome-phenome Archive1
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- GTN547
- European Bioinformatics Institute (EBI)119
- PaN Training38
- SIB Swiss Institute of Bioinformatics20
- NBIS9
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- Danish National Health Data Science Sandbox3
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- Keyword
- jupyter-notebook56
- Foundations of Data Science50
- biodiversity47
- microgalaxy41
- Galaxy Server administration40
- Proteomics37
- Statistics and machine learning36
- Rare Diseases & Research35
- Single Cell35
- Ecology30
- Microbiome27
- Genome Annotation25
- Transcriptomics25
- Contributing to the Galaxy Training Material24
- Using Galaxy and Managing your Data24
- FAIR Data, Workflows, and Research21
- Imaging20
- ansible20
- Variant Analysis18
- git-gat18
- interactive-tools18
- work-in-progress18
- Assembly17
- Data management17
- fair17
- Development in Galaxy16
- elixir16
- jbrowse116
- Teaching and Hosting Galaxy training15
- gmod15
- earth-system14
- Climate13
- Introduction to Galaxy Analyses13
- prokaryote13
- FAIR12
- Introduction12
- paper-replication12
- MIGHTS11
- cyoa11
- Image segmentation10
- Sequence analysis10
- ai-ml10
- assembly10
- data stewardship10
- eukaryote10
- label-free10
- metabolomics10
- plants10
- 10x9
- CONVERGE9
- Computational chemistry9
- DDA9
- Metabolomics9
- R9
- covid199
- metagenomics9
- ocean9
- one-health9
- Epigenetics8
- Galaxy Community Building8
- PDBe8
- workflows8
- EBV dataset7
- EBV workflow7
- Metadata7
- Protein families7
- collections7
- data management7
- dmp7
- español7
- metabarcoding7
- nanopore7
- transcriptomics7
- Genome sequencing6
- Overlay6
- Python6
- SARS-CoV-26
- SQL6
- Sequence alignments6
- Variants6
- deutsch6
- ecology6
- illumina6
- italiano6
- rmarkdown-notebook6
- train-the-trainers6
- virology6
- 16S5
- Bioimaging5
- Digital Humanities5
- Large Language Model5
- Network analysis5
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- Small molecules5
- Systems biology5
- deconvolution5
- deploying5
- jobs5
- label-TMT115
- mouse5
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- Competency level
- Beginner466
- Not specified162
- Intermediate129
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- Licence
- Creative Commons Attribution 4.0 International563
- License Not Specified198
- Creative Commons Attribution Share Alike 4.0 International19
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International3
- Creative Commons Attribution Non Commercial Share Alike 4.0 International2
- MIT License2
- Creative Commons Attribution Non Commercial 4.0 International1
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- Target audience
- Students443
- PhD students121
- Clinicians120
- Galaxy Administrators56
- Instructors47
- health professionals13
- Scientists12
- healthcare professionals11
- PhD candidates9
- Researcher in life sciences9
- Health Care Professionals8
- Patient Advocates 8
- rare disease patients representatives7
- Life Science Researchers7
- Bioinformaticians6
- Researchers6
- Anyone wishing to use bioinformatics resources to find basic information about a virus.4
- Bench biologists3
- Biologists3
- Biologists with little or no prior computational experience3
- Biomedical researchers3
- Clinical Scientists3
- General Physicians3
- biologists3
- medical students3
- Bioinformaticians, Biologists with little or no prior computational experience.2
- Laboratory technicians2
- Life scientists, bioinformaticians and researchers who are familiar with writing Python code and core Python elements, and would like to use it in their daily data exploration and visualization tasks.2
- PhD Students2
- Veterinarians2
- biocurators2
- All postgraduates1
- Analysts1
- Anyone dealing with cell lines with no or little knowledge of the Cellosaurus resource.1
- Anyone wishing to interpret graphs showing the progression of COVID-19.1
- Biologists and bioinformaticians1
- Biomedical Researchers1
- Biotechnology Companies1
- Data Managers1
- Data Scientists1
- Fellows and Residents1
- Graduate Students1
- Healthcare1
- Life science researchers who are new to high performance computing1
- Life scientists with no or little knowledge of the ISMARA tool.1
- Neurological1
- Neurologists1
- PaN Community1
- Paediatricians1
- Postgraduate students1
- Primary care doctors1
- Research Scientists1
- Research Software Engineers1
- Students, postdocs, and researchers, from any scientific environment (academia, facilities, companies, etc.) interested in viral data, as well as anyone looking for virion and viral genome images for use in teaching or publications.1
- Support Staff1
- beamline users1
- beginner1
- beginner bioinformaticians1
- geneticists1
- physisians1
- postdocs1
- postdoctoral researchers1
- postgrad1
- science students1
- scientists1
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- Author
- Helena Rasche95
- Bérénice Batut81
- Saskia Hiltemann38
- Björn Grüning28
- Anton Nekrutenko25
- Yvan Le Bras25
- The Carpentries24
- Subina Mehta23
- Fotis E. Psomopoulos21
- Bazante Sanders18
- Marie Josse18
- Wendi Bacon18
- Anthony Bretaudeau17
- Katarzyna Kamieniecka17
- Krzysztof Poterlowicz17
- Simon Gladman15
- Anne Fouilloux14
- Nicola Soranzo14
- Donny Vrins13
- James Johnson13
- Katherine Do13
- Monique Zahn13
- Wolfgang Maier13
- Julia Jakiela12
- Mehmet Tekman12
- Paul Zierep12
- Simon Bray12
- Khaled Jum'ah11
- Maria Doyle11
- Anup Kumar10
- Cristóbal Gallardo10
- Delphine Lariviere10
- Melanie Föll10
- Pavankumar Videm10
- Pratik Jagtap10
- Avans Hogeschool9
- Marius van den Beek9
- Nate Coraor9
- Diana Chiang Jurado8
- Timothy J. Griffin8
- Anika Erxleben7
- Daniel Blankenberg7
- Dave Clements7
- Florian Christoph Sigloch7
- Laura Cooper7
- Leonid Kostrykin7
- Lucille Delisle7
- Matthias Fahrner7
- Praveen Kumar7
- Robert Andrews7
- Allegra Via6
- Andrew Mason6
- Anna Syme6
- Branka Franicevic6
- Coline Royaux6
- ELIXIR Goblet Train the Trainers6
- Emma Leith6
- Patricia Palagi6
- Philippe Rocca-Serra6
- Raphael Mourad6
- Sara Morsy6
- Valentin Loux6
- Xenia Perez Sitja6
- Alex Ostrovsky5
- Beatriz Serrano-Solano5
- Christopher Barnett5
- Clemens Blank5
- Daniela Schneider5
- Dechen Bhuming5
- Erwan Corre5
- Joachim Wolff5
- John Chilton5
- John Davis5
- Kellie Snow5
- Korneel Hens5
- Marisa Loach5
- Munazah Andrabi5
- Nadia Goué5
- Nick Juty5
- Ray Sajulga5
- Riccardo Massei5
- Saskia Lawson-Tovey5
- Solenne Correard5
- Stéphanie Robin5
- Tristan Reynolds5
- Alexandre Cormier4
- Alireza Khanteymoori4
- Amirhossein Naghsh Nilchi4
- Anne Pajon4
- Gildas Le Corguillé4
- Helge Hecht4
- Hélène Chiapello4
- Jeremy Goecks4
- Junhao Qiu4
- Kaivan Kamali4
- Keiler Collier4
- Laura Leroi4
- Mallory Freeberg4
- Mira Kuntz4
- Morgan Howells4
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- Contributor
- Saskia Hiltemann476
- Helena Rasche394
- Björn Grüning350
- Bérénice Batut196
- Nicola Soranzo112
- Martin Čech93
- Anthony Bretaudeau86
- Niall Beard65
- Pavankumar Videm63
- Wendi Bacon63
- Armin Dadras62
- Marius van den Beek57
- Nate Coraor52
- Cristóbal Gallardo49
- Gildas Le Corguillé49
- Teresa Müller45
- Beatriz Serrano-Solano42
- Lucille Delisle40
- Yvan Le Bras39
- William Durand38
- Marie Josse37
- Mehmet Tekman37
- Simon Gladman35
- Wolfgang Maier35
- Melanie Föll31
- Anup Kumar29
- Simon Bray25
- Peter van Heusden24
- Donny Vrins23
- Subina Mehta23
- Maria Doyle22
- Tristan Reynolds21
- Leonid Kostrykin20
- Bazante Sanders19
- Julia Jakiela19
- Deepti Varshney17
- Paul Zierep17
- Anne Fouilloux16
- Anton Nekrutenko16
- Khaled Jum'ah16
- Daniela Schneider14
- Delphine Lariviere14
- Pratik Jagtap14
- Diana Chiang Jurado13
- Marisa Loach13
- Mélanie Petera13
- Timothy J. Griffin13
- David López12
- Mira Kuntz12
- Pablo Moreno12
- Matthias Bernt11
- Gianmauro Cuccuru10
- Paul De Geest9
- Stéphanie Robin9
- Amirhossein Naghsh Nilchi8
- Anna Syme8
- Elin Kronander8
- Katarzyna Kamieniecka8
- Verena Moosmann8
- Wolmar Nyberg Åkerström8
- Enis Afgan7
- Hans-Rudolf Hotz7
- Katherine Do7
- Mallory Freeberg7
- Markus Englund7
- Mattias Strömberg7
- Stephan Nylinder7
- Yvonne Kallberg7
- Bert Droesbeke6
- Christopher Barnett6
- Clemens Blank6
- Erik Hedman6
- Florian Christoph Sigloch6
- Linelle Abueg6
- Morgan Howells6
- Niclas Jareborg6
- Solenne Correard6
- Alireza Khanteymoori5
- Clea Siguret5
- Dave Clements5
- Ekaterina Polkh5
- Florian Heyl5
- John Chilton5
- John Davis5
- Kaivan Kamali5
- Riccardo Massei5
- Tomas Klingström5
- Wandrille Duchemin5
- olisand5
- Alexandre Cormier4
- Coline Royaux4
- Eli Chadwick4
- Fabio Cumbo4
- Fotis E. Psomopoulos4
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- Paulo Cilas Morais Lyra Junior4
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- FREE online course5
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- youtube video5
- examples4
- online course4
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- Life Sciences Literature Database3
- Mock data3
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- online tutorial3
- scripts3
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- wiki3
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- Related resource
- Associated Training Datasets290
- Associated Workflows273
- Jupyter Notebook (with Solutions)51
- Jupyter Notebook (without Solutions)51
- The Carpentries7
- Quarto/RMarkdown Notebook6
- GitHub1
- McStas1
- McXtrace1
- OpenCloning1
- OpenRefine1
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- Collection
- ELIXIR Biodiversity Community6
- Elements of Data Management5
- SARS-CoV-2 : Studying a new virus5
- ELIXIR Federated Human Data Community2
- 523BET - Nhà Cái 523BET Casino Uy Tín Nhất Việt Nam1
- ELIXIR hCNV community - collection of courses and materials.1
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