Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly3
    • Sequence assembly3
    • Biodiversity2
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Personal genomics2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • 3C technologies1
    • 3C-based methods1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • QUAST3
    • BUSCO2
    • BEDTools1
    • Bwa-mem21
    • Cutadapt1
    • Flye1
    • GenomeScope 2.01
    • Merqury1
    • Minimap21
    • SALSA1
    • gfastats1
    • purge_dups1
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • R313
    • Transcriptomics149
    • Genomics135
    • Python132
    • Next generation sequencing115
    • RNA-seq113
    • Bioinformatics83
    • Data management80
    • Statistics75
    • Galaxy Server administration68
    • Machine learning64
    • Data science63
    • Unix/Linux60
    • Single-cell sequencing59
    • FAIR data58
    • Reproducibility56
    • jupyter-notebook54
    • Foundations of Data Science51
    • Proteomics49
    • Version control49
    • Variant analysis48
    • Data visualization47
    • biodiversity47
    • Workflows46
    • Development in Galaxy45
    • Statistics and machine learning43
    • Single Cell42
    • Genome assembly41
    • microgalaxy41
    • General36
    • Genome annotation36
    • Genome Annotation32
    • training31
    • Ecology30
    • Metagenomics30
    • Microbiome29
    • programming29
    • Using Galaxy and Managing your Data28
    • Assembly27
    • Contributing to the Galaxy Training Material27
    • Nextflow27
    • Epigenetics26
    • Long read sequencing26
    • FAIR24
    • metagenomics24
    • Containerization22
    • Spatial transcriptomics22
    • Docker21
    • Shiny21
    • ansible21
    • High performance computing20
    • Imaging20
    • reproducible research20
    • CfRR19
    • ChIP-seq19
    • Microbiology19
    • git-gat19
    • scientific computing19
    • Artificial intelligence18
    • Variant Analysis18
    • interactive-tools18
    • Climate17
    • Comparative genomics17
    • Metabolomics17
    • Teaching and Hosting Galaxy training17
    • work-in-progress17
    • FAIR Data, Workflows, and Research16
    • Galaxy16
    • Introduction to Galaxy Analyses16
    • Sequence analysis16
    • jbrowse116
    • prokaryote16
    • earth-system15
    • elixir15
    • gmod15
    • Image analysis14
    • Quarto14
    • ATAC-seq13
    • Pathways and Networks13
    • Shell13
    • data management13
    • Cloud computing12
    • Enrichment analysis12
    • Introduction12
    • Programming12
    • assembly12
    • cyoa12
    • paper-replication12
    • transcriptomics12
    • Analysis11
    • Deep learning11
    • Introduction bioinformatics11
    • MIGHTS11
    • Multiomics11
    • Rmarkdown11
    • Snakemake11
    • bioinformatics11
    • covid1911
    • fair11
    • Evolution10
    • Show N_FILTERS more
    • Competency level
    • Intermediate3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Alex Ostrovsky2
    • Anton Nekrutenko2
    • Brandon Pickett2
    • Cristóbal Gallardo2
    • Delphine Lariviere2
    • Linelle Abueg2
    • Alexandre Cormier1
    • Anna Syme1
    • Anthony Bretaudeau1
    • Erwan Corre1
    • Giulio Formenti1
    • Laura Leroi1
    • Marcella Sozzoni1
    • Solenne Correard1
    • Stéphanie Robin1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning3
    • Bérénice Batut3
    • Cristóbal Gallardo3
    • Helena Rasche3
    • Saskia Hiltemann3
    • Anna Syme2
    • Anton Nekrutenko2
    • Delphine Lariviere2
    • Linelle Abueg2
    • Anthony Bretaudeau1
    • Marius van den Beek1
    • Saim Momin1
    • Solenne Correard1
    • Stéphanie Robin1
    • Teresa Müller1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets2
    • Associated Workflows2
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Register training material

User: scraper

and Keywords: pacbio

3 materials found
  • e-learning

    Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

    •• Intermediate
    Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio
  • e-learning

    Genome assembly using PacBio data

    •• Intermediate
    Sequence assembly Genomics Biodiversity Assembly assembly biodiversity pacbio
  • e-learning

    Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

    •• Intermediate
    Sequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.