Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics4
    • Transcriptome4
    • Transcriptomics4
    • Bottom-up proteomics1
    • Discovery proteomics1
    • MS-based targeted proteomics1
    • MS-based untargeted proteomics1
    • Metaproteomics1
    • Peptide identification1
    • Protein and peptide identification1
    • Proteomics1
    • Quantitative proteomics1
    • Targeted proteomics1
    • Top-down proteomics1
    • Show N_FILTERS more
    • Tool
    • Galaxy5
    • GOseq2
    • Cardinal1
    • Cutadapt1
    • DESeq21
    • EGSEA1
    • FastQC1
    • HISAT21
    • MultiQC1
    • R1
    • RSeQC1
    • SAMtools1
    • Subread1
    • annotatemyids1
    • fgsea1
    • ggplot21
    • Show N_FILTERS more
    • Content provider
    • GTN5
    • Show N_FILTERS more
    • Keyword
    • R313
    • Transcriptomics149
    • Genomics135
    • Python132
    • Next generation sequencing115
    • RNA-seq113
    • Bioinformatics83
    • Data management80
    • Statistics75
    • Galaxy Server administration68
    • Machine learning64
    • Data science63
    • Unix/Linux60
    • Single-cell sequencing59
    • FAIR data58
    • Reproducibility56
    • jupyter-notebook54
    • Foundations of Data Science51
    • Proteomics49
    • Version control49
    • Variant analysis48
    • Data visualization47
    • biodiversity47
    • Workflows46
    • Development in Galaxy45
    • Statistics and machine learning43
    • Single Cell42
    • Genome assembly41
    • microgalaxy41
    • General36
    • Genome annotation36
    • Genome Annotation32
    • training31
    • Ecology30
    • Metagenomics30
    • Microbiome29
    • programming29
    • Using Galaxy and Managing your Data28
    • Assembly27
    • Contributing to the Galaxy Training Material27
    • Nextflow27
    • Epigenetics26
    • Long read sequencing26
    • FAIR24
    • metagenomics24
    • Containerization22
    • Spatial transcriptomics22
    • Docker21
    • Shiny21
    • ansible21
    • High performance computing20
    • Imaging20
    • reproducible research20
    • CfRR19
    • ChIP-seq19
    • Microbiology19
    • git-gat19
    • scientific computing19
    • Artificial intelligence18
    • Variant Analysis18
    • interactive-tools18
    • Climate17
    • Comparative genomics17
    • Metabolomics17
    • Teaching and Hosting Galaxy training17
    • work-in-progress17
    • FAIR Data, Workflows, and Research16
    • Galaxy16
    • Introduction to Galaxy Analyses16
    • Sequence analysis16
    • jbrowse116
    • prokaryote16
    • earth-system15
    • elixir15
    • gmod15
    • Image analysis14
    • Quarto14
    • ATAC-seq13
    • Pathways and Networks13
    • Shell13
    • data management13
    • Cloud computing12
    • Enrichment analysis12
    • Introduction12
    • Programming12
    • assembly12
    • cyoa12
    • paper-replication12
    • transcriptomics12
    • Analysis11
    • Deep learning11
    • Introduction bioinformatics11
    • MIGHTS11
    • Multiomics11
    • Rmarkdown11
    • Snakemake11
    • bioinformatics11
    • covid1911
    • fair11
    • Evolution10
    • Show N_FILTERS more
    • Competency level
    • Beginner5
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International5
    • Show N_FILTERS more
    • Target audience
    • Students5
    • Show N_FILTERS more
    • Author
    • Belinda Phipson3
    • Maria Doyle3
    • Harriet Dashnow2
    • Anna Trigos1
    • Björn Grüning1
    • Casper de Visser1
    • Charity Law1
    • Charlotte Adang1
    • Jovana Maksimovic1
    • Matt Ritchie1
    • Melanie Föll1
    • Peter-Bram 't Hoen1
    • Shian Su1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning4
    • Helena Rasche4
    • Nicola Soranzo4
    • Saskia Hiltemann4
    • Bérénice Batut2
    • Maria Doyle2
    • Armin Dadras1
    • Gildas Le Corguillé1
    • Martin Čech1
    • Mehmet Tekman1
    • Melanie Föll1
    • Peter-Bram 't Hoen1
    • Xavier Garnier1
    • Show N_FILTERS more
    • Resource type
    • e-learning5
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows5
    • Associated Training Datasets4
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Register training material

Keywords: mouse

and User: scraper

5 materials found
  • e-learning

    RNA-Seq data analysis, clustering and visualisation tutorial

    • Beginner
    Transcriptomics PCA Transcriptomics bulk clustering collections mouse rna-seq work-in-progress
  • e-learning

    3: RNA-seq genes to pathways

    • Beginner
    Transcriptomics Transcriptomics mouse
  • e-learning

    2: RNA-seq counts to genes

    • Beginner
    Transcriptomics QC Transcriptomics limma-voom mouse
  • e-learning

    1: RNA-Seq reads to counts

    • Beginner
    Transcriptomics QC Transcriptomics collections mouse
  • e-learning

    Mass spectrometry imaging: Loading and exploring MSI data

    • Beginner
    Proteomics Proteomics imaging mouse
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.