France
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200 billion sequences and counting: analysis, discovery and exploration of datasets with EBI Metagenomics
metagenomics
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Assessing microbial biogeography by using a metagenomic approach
metagenomics
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Deciphering the human intestinal tract microbiome using metagenomic computational methods
metagenomics
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Dr Jekyll and Mr Hyde: The dual face of metagenomics in phylogenetic analysis
metagenomics
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Exploiting collisions between DNA molecules to characterize the genomic structures of complex communities
metagenomics
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Fast filtering, mapping and assembly of 16S ribosomal RNA
metagenomics
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Gut metagenomics in cardiometabolic diseases
metagenomics
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Hidden in the permafrost
metagenomics
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Holistic metagenomics in marine communities
metagenomics
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MG-RAST — experiences from processing a quarter million metagenomic data sets
metagenomics
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Multiple Comparative Metagenomics using Multiset k-mer Counting
metagenomics
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New perspectives on nitrite-oxidizing bacteria - linking genomes to physiology
metagenomics
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Prokaryotic Phylogeny on the Fly: databases and tools for online taxonomic identification
metagenomics
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Rationale and Tools to look for the unknown in (metagenomic) sequence data
metagenomics
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Reconstructing genomes from metagenomes: The holy grail of microbiology
metagenomics
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Revealing and analyzing microbial networks: from topology to functional behaviors
metagenomics
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From Samples to Data : Assuring Downstream Analysis with Upstream Planning
metagenomics
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Sequencing 6000 chloroplast genomes : the PhyloAlps project
metagenomics
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Soil metagenomics, potential and pitfalls
metagenomics
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Welcome message
biohackaton
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Who is doing what on the cheese surface? Overview of the cheese microbial ecosystem functioning by metatranscriptomic analyses
metagenomics
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(Proxy) Web Server Choices and Configuration
Galaxy NGiNX
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Galaxy Administration
Galaxy
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RADSeq Data Analysis
NGS
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Galaxy Docker Training Tutorial
Docker Galaxy
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Defining and importing genomes, Data Managers into Galaxy
Galaxy
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Galaxy III: Visualization
Genomics
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Users, Groups, and Quotas in Galaxy
Galaxy
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Connecting Galaxy to a compute cluster
Cluster Galaxy
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Galactic Database
Galaxy
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Workshops and courses
Interactive Online Companionship - R formation Session 2027
2 October 2026 - 31 January 2027
Online
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Workshops and courses
AlphaFold et au-delà : Modélisation de la structure 3D des protéines avec des outils d’IA - édition 2027/ AlphaFold & beyond: 3D Protein Structure Modeling with AI Tools - 2027 session
20 - 22 January 2027
ORSAY CEDEX, France
Face-to-face
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Workshops and courses
Galaxy Beyond Basics: Mastering Workflows, Automation, and Scalability 2026
12 - 16 October 2026
Paris, France
Face-to-face
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Workshops and courses
Analyses Single Cell RNA-seq (ScRNA-seq) avec R
1 - 2 October 2026
Bordeaux, France
Face-to-face
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Workshops and courses
Formation metabarcoding ABiMS SeBiMER
6 - 11 December 2026
Face-to-face
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Workshops and courses
EB3I - Ecole de Bioinformatique niveau débutant 2026
15 - 20 November 2026
Face-to-face
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Workshops and courses
Construction and analysis of eukaryotic pangenome graphs - 30 novembre 2026
30 November - 2 December 2026
Castanet-Tolosan, France
Face-to-face
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Workshops and courses
Analyses NGS avec R
24 - 25 September 2026
Bordeaux, France
Face-to-face
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IFB French Institute of Bioinformatics
The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research...
149 training materials8 events (513 past events)IFB French Institute of Bioinformatics http://www.france-bioinformatique.fr https://rdm.tesshub.org/content_providers/ifb-french-institute-of-bioinformatics The French Institute of Bioinformatics (CNRS IFB) is a national service infrastructure in bioinformatics. IFB’s principal mission is to provide basic services and resources in bioinformatics for scientists and engineers working in the life sciences. IFB is the French node of the European research infrastructure, ELIXIR. /system/content_providers/images/000/000/049/original/logo-ifb-couleur.svg?1663599376 -
Workflow4metabolomics
In the context of collaboration between metabolomics (MetaboHUB French infrastructure) and bioinformatics platforms (IFB: Institut Français de Bioinformatique), we have developed full LC/MS, FIA-MS, GC/MS and NMR pipelines using Galaxy framework for data analysis including preprocessing,...
Workflow4metabolomics https://workflow4metabolomics.org https://test-space.tesshub.org/content_providers/workflow4metaolomics In the context of collaboration between metabolomics (MetaboHUB French infrastructure) and bioinformatics platforms (IFB: Institut Français de Bioinformatique), we have developed full LC/MS, FIA-MS, GC/MS and NMR pipelines using Galaxy framework for data analysis including preprocessing, normalization, quality control, statistical analysis (Univariate, Multivariate PLS/OPLS) and annotation steps. Those modular and extensible workflows are composed with existing components (XCMS and CAMERA packages, etc.) but also a whole suite of complementary homemade tools. This implementation is accessible through a web interface, which guarantees the parameters completeness. The advanced features of Galaxy have made possible the integration of components from different sources and of different types. Thus, an extensible Virtual Research Environment (VRE) is offered to metabolomics communities (platforms, end users, etc.), and enables preconfigured workflows sharing for new users, but also experts in the field. /system/content_providers/images/000/000/659/original/17082156.png?1667905557
Activity log
