Workflows
-
ELIXIR TeSS
Phylogeny.fr "One Click" phylogeny
• BeginnerPhylogeny.fr is a free, simple to use web service dedicated to reconstructing and analysing phylogenetic relationships between molecular sequences.
Phylogeny.fr runs and connects various bioinformatics programs to reconstruct a robust phylogenetic tree from a set of sequences.The "one click"...
-
ELIXIR TeSS
Plant phenotyping and plant genomic data management
• BeginnerA learning path set for plant phenotyping and plant genomic data management with 4 domains : FAIR essentials, plant biological material, plant phenotyping experiment and omics experiments. At the end of the learning path, researchers or data managers specialized in plant research are able to :
... -
ELIXIR TeSS
Protein Structure Modelling
This is the a workflow of protein modelling.
-
ELIXIR TeSS
READemption
READemption is a pipeline for the computational evaluation of RNA-Seq data. It was originally developed to process dRNA-Seq reads (as introduced by Sharma et al., Nature, 2010 (Pubmed)) originating from bacterial samples. Meanwhile is has been extended to process data generated in different...
-
ELIXIR TeSS
RNA-seq summarization with annotated genome
Basic workflow for RNA-seq analysis to get to a count table.
-
ELIXIR TeSS
SIGNOR USER GUIDE
test
-
ELIXIR TeSS
Structural bioinformatics workflow
A workflow with suggested common stages taken in structural bioinformatics
-
ELIXIR TeSS
Text mining and annotation
Natural language processing (http://edamontology.org/topic_0218)
-
ELIXIR TeSS
Text mining and annotation (more detail)
Natural language processing (http://edamontology.org/topic_0218)
-
ELIXIR TeSS
Training course in Transcriptomics
• BeginnerWorkflow for Transcirptomics course for CABANA learning